Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq647 102 6e-17 >seq647 Length=994 Score = 102 bits (112), Expect = 6e-17 Identities = 129/175 (74%), Gaps = 7/175 (4%) Strand=Plus/Minus Query 94600 TTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATG 94659 ||||| || || || | || |||||||| || ||||| |||||||| || || ||||| Sbjct 897 TTGATAAGACCTGTGATAACGTCCACGGAAGGACGCTGGGTCGCCAGCACAAGGTGAATA 838 Query 94660 CCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAG 94719 |||||||||||||| |||||||| | ||| ||| | ||| | |||||| || Sbjct 837 CCGGCCGCACGCGCTTTCTGCGCCAGACGGGCAA---TCAACTCTTCTACTTTCT--TAC 783 Query 94720 CCAC--CCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTAGGGGAG 94772 | || |||||| ||||| |||| |||||| |||| || ||||| || || || Sbjct 782 CAACGGTCATCATCAGGTCAGCGAATTCATCGACCAGCACGACGATATAAGGCAG 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340111415164976