Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq38 172 8e-38 >seq38 Length=1249122 Score = 172 bits (190), Expect = 8e-38 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 140508 AATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTTAAAAGATCAACGCGGG 140567 ||||||||||| ||||||||| | || ||||||||||| | |||||||||||||| || Sbjct 844935 AATTTTTGTTTGGGAAAACACTTGTCCTGTGAAAACGATTTATTAAAAGATCAACGTGGA 844876 Query 140568 TCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTAAACCGTCT 140627 || || || || ||||| || |||||| | | || |||||||| | || || || || Sbjct 844875 TCACCTGCTTACATTTCACCTGATGTTCTATGTGGCAAACCATACCTTGGAAAGCCTTCA 844816 Query 140628 GATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATTTCCATTTTAT 140687 ||||||||||| | ||||| ||||||||| ||||| | ||||||||||||||||||| Sbjct 844815 GATATGTGGGCATTAGGAGTTGTATTGTATACTATGTTATATGGGCAATTTCCATTTTAT 844756 Query 140688 GATGCGTCTCCAACAGAGCTCTTTAGAAAAATAAA 140722 ||| ||| ||| | | || || |||||||| Sbjct 844755 GATAGTAGTCCCACACAATTATTCAGTAAAATAAA 844721 Score = 109 bits (120), Expect = 8e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 127420 AGAACAGCGAGGATCACCGGCATACATCTCCCCAGAAGTTATATCAGGTAAAAAATATTT 127479 ||| || || |||||||| || ||||| || || || ||| ||| || ||| ||| | Sbjct 844888 AGATCAACGTGGATCACCTGCTTACATTTCACCTGATGTTCTATGTGGCAAACCATACCT 844829 Query 127480 AGCAAAACCGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTTACGGACA 127539 | ||| || |||||| | ||||| |||||||| | || ||||| ||| | || || || Sbjct 844828 TGGAAAGCCTTCAGATATGTGGGCATTAGGAGTTGTATTGTATACTATGTTATATGGGCA 844769 Query 127540 ATTTCCATTTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAAGCAG 127592 ||||||||||||||| || || | | |||| || || ||||| ||||||| Sbjct 844768 ATTTCCATTTTATGATAGTAGTCCCACACAATTATTCAGTAAAATAAAAGCAG 844716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704560760513040