Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq1566 80.6 7e-11 >seq1566 Length=390 Score = 80.6 bits (88), Expect = 7e-11 Identities = 121/171 (71%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 14793 CCAGTTTGATGCGCTGGTTTCGTTCACTTACAACTTGGGTGAAGGCAATCT---GAAATC 14849 ||| || || ||||||||||||||| | | |||| | || | |||||| | |||||| Sbjct 84 CCAATTCGACGCGCTGGTTTCGTTCGCCTTCAACCTTGGCGTGGGCAATTTAAAGAAATC 143 Query 14850 CAGCACGCTGCTGAAAATGGTCAACGCTGGCAACTTTGCCGGTGCTGCTGAACAGTTCAA 14909 ||||||||| |||| ||||||| ||| | | || || || |||||||| Sbjct 144 ---CACGCTGCTCAAAAAATTCAACGCAGGCGATATCCAGGGCGCCGCACTGCAGTTCAA 200 Query 14910 ACGCTGGAACAAGGCGAACGGCAAGACGATGCGCGGCCTGACCCGACGCCG 14960 | ||||||| ||||| ||| ||| || ||| || ||||||||||| Sbjct 201 AAGCTGGAATAAGGCAGGCGGTAAGGTTTTGACCGGGCTTACCCGACGCCG 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135397649404442