Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_025449.1 Length=166783 Score E Sequences producing significant alignments: (Bits) Value seq720 206 3e-48 seq151 86.0 7e-12 >seq720 Length=915 Score = 206 bits (228), Expect = 3e-48 Identities = 158/187 (84%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 60221 GCCATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 60280 ||| ||||| || || ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 303 GCCGTTACAGGCTTTCAGTAAAGGTACGGGCGATAACGTCGCGCTGCTGTTCTGGAGTCA 362 Query 60281 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 60340 | |||||||||||||| ||||| || || || |||||||| || || || |||||||| | Sbjct 363 GTGAGTTAAAGCGAACCGCATAGCCAGACACGCGGATGGTAAGTTGTGGGTATTTTTCTG 422 Query 60341 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 60400 |||||| ||| ||||| ||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct 423 GATGCTCAACGGCATCCATCAGCGTTTCGCGGCGCAGCACGTTTACGTTCAGGTGCTGAC 482 Query 60401 CACCTTC 60407 ||||||| Sbjct 483 CACCTTC 489 >seq151 Length=3046 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 68750 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 68809 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 1203 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 1144 Query 68810 ACTGAGCTAAATCAGCA 68826 |||||||||| || ||| Sbjct 1143 ACTGAGCTAAGTCGGCA 1127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 69580 ATTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATA-C 69638 |||||||||| | | ||||||||| | ||||||||| ||||||| ||||||||||| | Sbjct 1490 ATTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGC 1431 Query 69639 CATTATACGATATCCGCA 69656 ||||||||||| ||||| Sbjct 1430 CATTATACGATGCCCGCA 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533561212497960