Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_027353.1 Length=167063 Score E Sequences producing significant alignments: (Bits) Value seq720 203 3e-47 seq151 86.0 7e-12 >seq720 Length=915 Score = 203 bits (224), Expect = 3e-47 Identities = 157/187 (84%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 61404 GCCATTACAAACTCTCGGTGAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 61463 ||| ||||| || || || |||||||| ||||||||||||||||||||||| ||||||| Sbjct 303 GCCGTTACAGGCTTTCAGTAAAGGTACGGGCGATAACGTCGCGCTGCTGTTCTGGAGTCA 362 Query 61464 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 61523 | |||||||||||||| ||||| || || || |||||||| || || || |||||||| | Sbjct 363 GTGAGTTAAAGCGAACCGCATAGCCAGACACGCGGATGGTAAGTTGTGGGTATTTTTCTG 422 Query 61524 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 61583 |||||| ||| ||||| ||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct 423 GATGCTCAACGGCATCCATCAGCGTTTCGCGGCGCAGCACGTTTACGTTCAGGTGCTGAC 482 Query 61584 CACCTTC 61590 ||||||| Sbjct 483 CACCTTC 489 >seq151 Length=3046 Score = 86.0 bits (94), Expect = 7e-12 Identities = 90/114 (79%), Gaps = 6/114 (5%) Strand=Plus/Minus Query 69362 GCGCTCTACCAAACTGAGCTACACGGAGTAAATTAAATTGGAGCGGATAATGAGAATCGA 69421 |||||||||||| |||||| | | || | | |||||||||| | | ||||||| Sbjct 1521 GCGCTCTACCAA-CTGAGCCATATC-AGCACGT---ATTGGAGCGGGCAGCGGGAATCGA 1467 Query 69422 ACTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGCA 69474 || | ||||||||| ||||||| ||||||||||| |||||||||||| ||||| Sbjct 1466 ACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGCA 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534457184979560