Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013
-12-04] 2,457 sequences; 277,059,195 total letters
Query= NC_027404.1
Length=167785
Score E
Sequences producing significant alignments: (Bits) Value
seq720 212 7e-50
seq151 84.2 2e-11
>seq720
Length=915
Score = 212 bits (234), Expect = 7e-50
Identities = 159/187 (85%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 61042 GCCATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 61101
||| ||||| || || ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 303 GCCGTTACAGGCTTTCAGTAAAGGTACGGGCGATAACGTCGCGCTGCTGTTCTGGAGTCA 362
Query 61102 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 61161
| |||||||||||||| ||||| || || || |||||||| || || || |||||||| |
Sbjct 363 GTGAGTTAAAGCGAACCGCATAGCCAGACACGCGGATGGTAAGTTGTGGGTATTTTTCTG 422
Query 61162 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGAC 61221
|||||| ||| ||||| ||| ||||| || ||||| ||||||||||||||||| ||||
Sbjct 423 GATGCTCAACGGCATCCATCAGCGTTTCGCGGCGCAGCACGTTTACGTTCAGGTGCTGAC 482
Query 61222 CACCTTC 61228
|||||||
Sbjct 483 CACCTTC 489
>seq151
Length=3046
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 68832 ATTGGAGCGGATAATGAGAATCGAACTCACATCATCAGATTGGAAGTCTGAGGTAATA-C 68890
|||||||||| | | ||||||||| | ||||||||| ||||||| ||||||||||| |
Sbjct 1490 ATTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGC 1431
Query 68891 CATTATACGATATCCGCA 68908
||||||||||| |||||
Sbjct 1430 CATTATACGATGCCCGCA 1413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536767514021400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |