Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq289 291 8e-74 >seq289 Length=1704 Score = 291 bits (322), Expect = 8e-74 Identities = 224/266 (84%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAA 58136 ||||||| |||||||| ||||| |||||||||| ||||| || || || |||||||| | Sbjct 1131 GCACGCTGCAGCTGATCAAAGAGAACGGCTGTAAGGCGGGCCTAGTGTTTAACCCGGCCA 1190 Query 58137 CGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCG 58196 ||||||| || |||||||| || ||||||||||| ||||| ||||||||||||||||||| Sbjct 1191 CGCCGCTGAGCTATCTCGACTATGTCATGGACAAGCTGGACGTGATCCTGCTGATGTCCG 1250 Query 58197 TGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAG 58256 | ||||| || |||||||| ||||| || ||||| || ||||||||||| ||||| |||| Sbjct 1251 TTAACCCGGGTTTCGGCGGTCAGTCATTCATTCCCCACACGCTGGATAAGCTGCGTGAAG 1310 Query 58257 TGCGTCGCCGCATTGATGCGTCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGTGA 58316 | || || || ||||||| ||| |||||||| ||||| ||||||||||||||||| |||| Sbjct 1311 TACGCCGTCGTATTGATGAGTCAGGTTACGATATTCGTCTGGAAGTGGACGGCGGTGTGA 1370 Query 58317 AGGTGAACAATATCGGCGAGATCGCG 58342 | ||||| || || || || || ||| Sbjct 1371 AAGTGAATAACATTGGTGACATTGCG 1396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471227126992360