Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq720 197 1e-45 seq151 84.2 2e-11 >seq720 Length=915 Score = 197 bits (218), Expect = 1e-45 Identities = 156/187 (83%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 101919 GAAGGTGGTCAACACCTGAACGTTAACGTTTTGCGTCGTGAAACTCTGGAAGATGCAGTT 101978 ||||||||||| ||||||||||| ||||| |||| || ||||| ||| ||||| ||| Sbjct 489 GAAGGTGGTCAGCACCTGAACGTAAACGTGCTGCGCCGCGAAACGCTGATGGATGCCGTT 430 Query 101979 AAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTT 102038 ||||||| |||||||| || || || |||||||| || || || ||||| ||||||||| Sbjct 429 GAGCATCCAGAAAAATACCCACAACTTACCATCCGCGTGTCTGGCTATGCGGTTCGCTTT 370 Query 102039 AACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTCACCGAGAGTTTG 102098 ||||| |||||||| ||||||||||||||||||||||| |||||||| || || || || Sbjct 369 AACTCACTGACTCCAGAACAGCAGCGCGACGTTATCGCCCGTACCTTTACTGAAAGCCTG 310 Query 102099 TAATGGC 102105 ||| ||| Sbjct 309 TAACGGC 303 >seq151 Length=3046 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 93008 TGCGGATATCGTATAATGG-TATTACCTCAGACTTCCAATCTGATGATGTGAGTTCGATT 93066 ||||| |||||||||||| ||||||||||| ||||||| ||||||||| | |||||||| Sbjct 1413 TGCGGGCATCGTATAATGGCTATTACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATT 1472 Query 93067 CTCATTATCCGCTCCAAT 93084 | | | |||||||||| Sbjct 1473 CCCGCTGCCCGCTCCAAT 1490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534652378984480