Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq64 86.0 1e-12 >seq64 Length=39090 Score = 86.0 bits (94), Expect = 1e-12 Identities = 128/177 (72%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 25412 GGCTTGAGAAATATTACCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTTAAT 25471 ||||| || | ||| | |||||||| || | ||| | ||||||| |||||||| || Sbjct 6760 GGCTTTCGATACATTGCTGAGTTCTTCGGCCAGATTGAGCAAACCGGCTTTGTGTTTGAT 6701 Query 25472 GAGAGGGTTGTTAGAATAAAACATGAGAGTTTCCT--TTTTGTTTAGATTGATTTTTGAC 25529 | || ||| ||| || || |||||||||| ||| | || | || | |||| || Sbjct 6700 AACGGGATTGGTAGTATGAAGCATGAGAGTTACCTCGTGTTTTGTATAAGGATTA--GAT 6643 Query 25530 ACTCATATTCTAAACGGGAAACTCTCA-CTTTTTAGAGTGAATTGTCAGATCAAGTC 25585 || ||||| | |||| || |||||||| | ||| | ||| | |||||||||||||| Sbjct 6642 ACCCATAT-CAAAACCGGTAACTCTCAACCTTTCAAAGTCCAGTGTCAGATCAAGTC 6587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114319864406284