Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 1e-13 >seq13 Length=8037603 Score = 91.5 bits (100), Expect = 1e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 34484 GACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTG 34543 || |||||| | |||| || |||| | || ||||| ||||||| | ||| | Sbjct 7609530 GATCAGCTGGCGGACGTTATAGACAAAATTAAAAACAACCCCAATGACAGGCGAATCATT 7609589 Query 34544 ATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTC 34603 ||| | | ||||| || | ||| | || ||||||| ||||| || || || | ||| Sbjct 7609590 ATGAGTTCTTGGAATCCAATAGATATACCGATGATGGCTCTCCCACCCTGTCATTCGCTC 7609649 Query 34604 TGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGAC 34663 | ||||||||||| || || || | || || || || |||||| | | || || Sbjct 7609650 TCGCAATTCTACGTGTGTAACGGCGAATTATCTTGTCATCTTTATCAAAGGGCAGGTGAT 7609709 Query 34664 ATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCT 34723 ||||| || || || || ||||| |||||| || || || || || | |||||| ||| Sbjct 7609710 ATGGGATTGGGAGTTCCTTTCAATATTGCTTCGTATGCCCTACTTACTTGCATGATTGCT 7609769 Query 34724 CATGT 34728 || || Sbjct 7609770 CACGT 7609774 Score = 91.5 bits (100), Expect = 1e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || ||||| |||||| | || || || || || |||||| ||||| || || || || Sbjct 7609774 ACGTGAGCAATCATGCAAGTAAGTAGGGCATACGAAGCAATATTGAAAGGAACTCCCAAT 7609715 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||| || || | | |||||| || || || || | || || || ||||||||| Sbjct 7609714 CCCATATCACCTGCCCTTTGATAAAGATGACAAGATAATTCGCCGTTACACACGTAGAAT 7609655 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || |||| | || || || ||||| ||||||| || | ||| | || ||||| | Sbjct 7609654 TGCGAGAGCGAATGACAGGGTGGGAGAGCCATCATCGGTATATCTATTGGATTCCAAGAA 7609595 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 | ||| | ||| | ||||||| ||||| || | |||| || |||| | |||| Sbjct 7609594 CTCATAATGATTCGCCTGTCATTGGGGTTGTTTTTAATTTTGTCTATAACGTCCGCCAGC 7609535 Query 6857 TGGTC 6861 || || Sbjct 7609534 TGATC 7609530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448248632741040