Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=17417032 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTT 4629 ||||||| | ||||||||| ||| || || | ||| ||||||| |||||||||| Sbjct 7878544 CTTCGTCCCGCGAAATCAGTTCATTACTGAATGTCAGTCCAGGCATTAGTCCTCTCTTTT 7878485 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | ||||| ||||| || || || ||| ||||| || || || || || ||||| | Sbjct 7878484 TCAGCCAGAATATGGCAGCGAAACTGCCACTGAAGAAGATTCCCTCGACCGCAGCAAAGG 7878425 Query 4690 CTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTA 4748 | | || || | |||| ||| | | || |||||||| || || ||||| ||| Sbjct 7878424 CAATTACGCGCTCGGCAAACGTAGCACTC-TCGTGGTTAATCCAGTTCAAAGCCCAATTA 7878366 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA 4791 |||||||| ||||| || | ||| | || ||||| |||| Sbjct 7878365 GCTTTTTTAGCTACGCAGGGCAGTGTTTCGATGGCGTTGAATA 7878323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427036812133181