Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq64 104 6e-18 >seq64 Length=39090 Score = 104 bits (114), Expect = 6e-18 Identities = 139/191 (73%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 10260 CGGTACGCAGCCCGCAGAGCAACGGCATGGCAGAGAGCTTCGTTAAGACAATCAAGCGCG 10319 |||| |||||||||| || || |||||||| || | ||||| ||||| || ||| | Sbjct 4604 CGGTGAGCAGCCCGCAAAGTAATGGCATGGCCGAACGGTTCGTGAAGACGATGAAGGAAG 4663 Query 10320 ACTACGTGGCGCACATGCCCAAGCCGGATC-GAGAGACAGCCTTGCGCAACCTGACGATT 10378 | || | ||| |||||| || |||||| |||| |||||| |||| ||||| | Sbjct 4664 ATTATATCGCGTTCATGCCAAAACCGGATGTGAGA-ACAGCCCTGCGAAACCTTGCAGCA 4722 Query 10379 GCCTTCGAGCATTACAACGAGCAGCATCCGCACAGCGCCTTGAAATACCGCTCGCCGAGG 10438 || ||| ||| ||||| || | || ||||||||||| || ||| | ||| |||||| Sbjct 4723 GCGTTCATGCACTACAATGAAAACCACCCGCACAGCGCACTGGGATATCACTCTCCGAGG 4782 Query 10439 GAATTCAGGCG 10449 |||| | |||| Sbjct 4783 GAATACCGGCG 4793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138360762947526