Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq720 221 1e-52 seq151 86.0 7e-12 >seq720 Length=915 Score = 221 bits (244), Expect = 1e-52 Identities = 161/187 (86%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 60303 GCCATTACAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 60362 ||| |||||| || |||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 303 GCCGTTACAGGCTTTCAGTAAAGGTACGGGCGATAACGTCGCGCTGCTGTTCTGGAGTCA 362 Query 60363 GAGAGTTAAAGCGAACTGCATAACCGGATACGCGGATGGTCAGCTGCGGATATTTTTCCG 60422 | |||||||||||||| ||||| || || ||||||||||| || || || |||||||| | Sbjct 363 GTGAGTTAAAGCGAACCGCATAGCCAGACACGCGGATGGTAAGTTGTGGGTATTTTTCTG 422 Query 60423 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGAC 60482 |||||| ||| ||||| ||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct 423 GATGCTCAACGGCATCCATCAGCGTTTCGCGGCGCAGCACGTTTACGTTCAGGTGCTGAC 482 Query 60483 CACCTTC 60489 ||||||| Sbjct 483 CACCTTC 489 >seq151 Length=3046 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 70145 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 70204 |||||| || | ||||||||||| | ||||| || ||||||||| ||||||||||||| Sbjct 1203 TGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT 1144 Query 70205 ACTGAGCTAAATCAGCA 70221 |||||||||| || ||| Sbjct 1143 ACTGAGCTAAGTCGGCA 1127 Score = 86.0 bits (94), Expect = 7e-12 Identities = 90/114 (79%), Gaps = 6/114 (5%) Strand=Plus/Minus Query 70364 GCGCTCTACCAAACTGAGCTACACGGAGTAAATTAAATTGGAGCGGATAATGAGAATCGA 70423 |||||||||||| |||||| | | || | | |||||||||| | | ||||||| Sbjct 1521 GCGCTCTACCAA-CTGAGCCATATC-AGCACGT---ATTGGAGCGGGCAGCGGGAATCGA 1467 Query 70424 ACTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGCA 70476 || | ||||||||| ||||||| ||||||||||| |||||||||||| ||||| Sbjct 1466 ACCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGCA 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530326111859040