Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq144 87.8 1e-12 >seq144 Length=14776 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 34194 TACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTG 34253 ||| |||||| || ||||||||||| || || ||| |||| ||||| ||||| || | Sbjct 7507 TACATTCTTTTTGAATGTTGTAGTCAGATAGGGTACGTCCGTCTTCCAATTGCTTTCCAG 7566 Query 34254 CGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA 34313 |||||||||| || || || || || | | ||||| || ||||| ||| | Sbjct 7567 CGAAAATGAGGCGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTAA 7626 Query 34314 GATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTT 34373 || | || ||||| | ||| || || | || |||||||| ||||| | |||| Sbjct 7627 CATTCTCAATGGAATCAGAACCTTCAACTTCTAAGGTTATGGTTTTACCGGTCAATGTTT 7686 Query 34374 TCACAAAGATCTGCAT 34389 | |||||||| ||||| Sbjct 7687 TGACAAAGATTTGCAT 7702 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| || || ||| |||||||| || ||||||||||||| ||| |||| Sbjct 12957 AGAACCAAATGCAATGTAGACTCTTTCTGAATATTGTAGTCGGACAAGGTACGTCCGTCT 12898 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| || || || || | ||||||||||| || | | ||||| || Sbjct 12897 TCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGAATACCTTCCTTATCC 12838 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| | | |||| ||| | | ||||| |||| |||||||| Sbjct 12837 TGGATCTTAGCCTTTACGTTCTCGATCGTATCAGATGGCTCGACCTCCAAAGTGATGGTC 12778 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | || || || || |||||||| Sbjct 12777 TTACCAGTCAATGTCTTGACGAATATCTGCAT 12746 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || || |||||||| |||| ||| | || ||||| ||||| || |||||| Sbjct 14188 TCTTTTTGGATATTGTAGTCAGACAATGTGCGGCCATCTTCCAATTGCTTTCCAGCGAAA 14129 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||| || || || | || ||||| || || || ||||| || Sbjct 14128 ATCAAACGCTGTTGATCTGGAGGGATGCCTTCCTTATCTTGAATTTTAGCCTTTACATTT 14069 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | | ||||| |||| |||||||||||||| || | |||||||| Sbjct 14068 TCAATGGTATCCGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTTAAGGTTTTCACG 14009 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 14008 AAGATTTGCAT 13998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322754024157920