Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq41364 122 7e-23 >seq41364 Length=3858 Score = 122 bits (134), Expect = 7e-23 Identities = 192/269 (71%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 ||||| || ||||| || || ||||| ||||||||| | ||||| || || ||||| Sbjct 2035 GAGGGTGACTTGGGACCAGTTTATGGCTTTCAATGGCGTCATTTCGGGGCAGAATACAAA 2094 Query 20275 GACATGAACACAA--ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || || ||| | |||||| || |||||||| |||||||| | || ||||| Sbjct 2095 -ACCTGT-CACGATGATTATTCAGGCCAAGGAGTCGATCAATTGTCCGAAGTCATTAACA 2152 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 |||||||||||| || |||| | |||||||| | | ||||||||| | | || Sbjct 2153 GAATTAAAACGAAACCCCACGATCGTCGAATTATTATGAGTGCCTGGAACCCGATGGACC 2212 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAAT 20451 | || |||||| || || || || || || | | ||| |||||||| || || ||| Sbjct 2213 TACCAAAAATGGCCTTACCACCCTGCCA-CTGTTTGGCCCAGTTTTACGTGGCCAACAAT 2271 Query 20452 GAATTGTCGTGTCAAATGTATCAACGATC 20480 ||||| ||||| ||| |||| ||| |||| Sbjct 2272 GAATTATCGTGCCAACTGTACCAAAGATC 2300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398791112753365