Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq41364 100 2e-16 >seq41364 Length=3858 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || ||||| || || || ||||||| || || | ||||| ||||| || || ||| Sbjct 2501 GGTTCAACATGATTCAAATAGACGTGGGTATCCCCAATAGTGTGGACAAAATCGCCGGGG 2442 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 || || || ||||| ||||| |||| || ||||| | |||||| |||||||| || || Sbjct 2441 GTAAGTCCGGTGACATGAGCAATCATGTAGGTCAGCAAGGCGTAACTGGCGATATTGAAT 2382 Query 21048 GGGACCCCGAGGCCCATGTCGGC 21070 || || || |||||||||||||| Sbjct 2381 GGAACTCCAAGGCCCATGTCGGC 2359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427354971765360