Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq51576 104 3e-17 >seq51576 Length=13142 Score = 104 bits (114), Expect = 3e-17 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 7013 ACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAAC 7072 |||||||| || || || || ||||||||||| |||||||| || | || ||| |||| Sbjct 2339 ACTGCCTGATTAGCCTGAGAGCCGGAATGAGGCTGAACGTTAGCATATTTACAATTAAAT 2398 Query 7073 AGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCA 7132 ||| ||| | ||||| || || || ||| || ||| ||| || ||| | Sbjct 2399 AGTGTTTTTACCCGCTCTATAGCTAGAAGCTCAGCTTTATCAACTTCACTACAACCGTTA 2458 Query 7133 TAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGCT 7192 ||||| ||||| ||||| ||||| |||||||| || ||||| | ||| || || ||||| Sbjct 2459 TAATAACGTTTTCCCGGGTATCCTTCAGCATATTTATTGGTCAGAATCGAGCCTTGTGCC 2518 Query 7193 TTCATAACATCGTCTGAC--ACATAGTTTTCGGACGCAATCAA 7233 | ||| | || | | | ||| | || || || |||||||| Sbjct 2519 T--CTAATACCGCCGGGCTTACAAAATTCTCAGAGGCAATCAA 2559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554802581675720