Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq29474 95.1 1e-14 >seq29474 Length=2751 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 5304 CTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAA 5363 |||||| | || |||||||| ||||| || || || ||||| || || | ||||| | Sbjct 2305 CTGGGTAGCAGATACGTTCGCAAATTAGTTGTGCAATTCTGTCACCTTTTTCAACCTTGA 2246 Query 5364 AGTCGCTGTTTCCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTC 5421 | || ||| || || ||| |||| || || || | || || || || ||||| || Sbjct 2245 AATC--TGTATCGGAGTGGTTGAACATGACGACACCCAGGTTTCCACGATAATCTTCATC 2188 Query 5422 GATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTAT 5481 || ||| || || || ||||| || |||||||| || || || ||||||||||| || | Sbjct 2187 GACAACTCCGGCCCCAACGTCAATGAAGTGTTTCACAGCCAGACCGGAACGTGGGGCAAC 2128 Query 5482 GCGTCCGTAGCAACC 5496 || || || || || Sbjct 2127 TCGGCCATAACAGCC 2113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447298412761840