Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq26050 174 2e-38 >seq26050 Length=12756 Score = 174 bits (192), Expect = 2e-38 Identities = 337/494 (68%), Gaps = 20/494 (4%) Strand=Plus/Minus Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557 |||| || || || || | ||||| |||||| | |||| |||||||| ||||||| Sbjct 2945 AATTGGGGTGCAAGCACGTCAAAGGTATTTTACTTTATGGTCCTCCTGGAACTGGTAAAA 2886 Query 164558 CATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTA 164614 |||| ||||||||| |||| | || | || ||| || || || |||||||||| Sbjct 2885 CATTGATGGCTCGACAAATTGGT-AATATGTTGAATGCTCGTGAGCCA--AAAATTGTTA 2829 Query 164615 ATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGT 164674 |||||||| | | ||| |||| || || ||||| || ||||| ||| || | || | Sbjct 2828 ATGGTCCTCAGATTTTGGACAAGTACGTCGGTGAATCTGAAGCAAATATTCGTCGATTAT 2769 Query 164675 TTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTT-TAGCTAGTAAATTACATGTTATT 164733 | || || ||||| || |||| | | ||| || | ||| ||| ||| | ||| Sbjct 2768 TCGCAGACGCCGAAGAGGAGGAAAAAAGATTGGGTCCTAAC-AGTGGATTGCATATAATT 2710 Query 164734 GTTTTTGATGAGATAGATGCTCTTTGCAAAAAACG------------TGGTGATAATATT 164781 |||| ||||| || ||||| |||| ||| | | ||| | || | Sbjct 2709 ATTTTCGATGAAATTGATGCCATTTGTAAAGCAAGAGGATCGGTTGCTGGGGCTACTGGG 2650 Query 164782 ATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAAT 164841 |||||||| | ||||| |||||||||||| | ||||| |||||||| ||| || || Sbjct 2649 GTTCATGATACCGTGGTCAATCAGTTGCTTGCCAAAATTGATGGTGTCGAACAATTGAAC 2590 Query 164842 AATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGA 164901 |||||||| | | || ||||| ||| ||| || | ||||| || ||| | | ||| Sbjct 2589 AATATTTTGGTCATTGGCATGACAAACAGACGGGACATGATTGACGAAGCTCTTATGCGA 2530 Query 164902 CCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAA 164961 || || ||| | || | |||| ||||| | || ||| | | |||||||| ||||| Sbjct 2529 CCCGGACGAATGGAGGTCCAAATGGAAATCAGTTTGCCCAATGAGGAAGGACGTGTTCAA 2470 Query 164962 ATTTTAAAAGTTCA 164975 ||||| || |||| Sbjct 2469 ATTTTGAACATTCA 2456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595270489561200