Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1270 84.2 4e-11 >seq1270 Length=21014 Score = 84.2 bits (92), Expect = 4e-11 Identities = 174/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| || | ||||| | || || |||| |||||||| || ||||| | | Sbjct 10224 CTATTCAATGCAGTTGAGACCCTTCCATGTGTCAAAAAGAAGGCCGATTGGGCTATTCAA 10283 Query 42669 TGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 ||||| |||| |||| | | ||| || | | |||| ||| | |||||||| Sbjct 10284 TGGATATGCAGTCAGAACGCCAATTACGGAGAACGCATTATAGCATTTGCTGCCGTCGAA 10343 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCG--A 42786 || || |||||| || || || ||||| |||||||| ||| | | ||| | | Sbjct 10344 GGAATTTTCTTCAGCGGAAGTTTTGCTTCCATTTTCTGGCTTAAGAA--ACGTGGCCTTA 10401 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACT 42846 |||| || || || ||||| ||||||||||| | || || || | || | |||| Sbjct 10402 TGCCTGGTCTGACATTCTCAAACGAACTCATTTCTCGTGATGAAGGATTACACTGCGACT 10461 Query 42847 TTGCCTGCCTCCTGTTC 42863 |||||||||| ||||| Sbjct 10462 TTGCCTGCCTTATGTTC 10478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943385924990320