Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq71022 98.7 1e-15 >seq71022 Length=3779 Score = 98.7 bits (108), Expect = 1e-15 Identities = 227/342 (66%), Gaps = 0/342 (0%) Strand=Plus/Minus Query 93979 GGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGG 94038 || |||| ||| | | | ||| | |||||| | || |||| || || ||||| || Sbjct 2344 GGCATTTACGATACCTTGAAGCAGTGTGCGCTAGTATCTAAATCTGCAGGCGGAATTGGC 2285 Query 94039 ATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCC 94098 | | ||| ||| | || |||| ||| | || ||| |||||| || |||| || Sbjct 2284 CTAAATGTTCACTGTATTCGGGCCAAGGGAACTTATATCGCCGGTACTAACGGCATTTCA 2225 Query 94099 AACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGT 94158 || ||||| || || ||| | || || | |||||| |||| || ||||||||||||||| Sbjct 2224 AATGGCCTAGTACCAATGTTGCGAGTGTACAACAATACGGCTCGTTACGTGGACCAGGGT 2165 Query 94159 GGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAG 94218 ||| | ||| || |||| || | ||||| || || ||||||| |||||| Sbjct 2164 GGTAATAAGAGACCTGGCGCTTTTGCCATTTATCTTGAACCTTGGCACGGGGACGTTTTC 2105 Query 94219 GCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTC 94278 | ||| | ||| || || || ||||| || | ||||| | || | || Sbjct 2104 GAGTTCCTAGACTTGAAGAAAAATACGGGCAAGGAAGAAGGAAGGGCTCGTGATTTATTT 2045 Query 94279 TACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 | ||| || ||| | ||||| | |||||| || | |||||| Sbjct 2044 TTCGCCCTTTGGATCCCAGATTTGTTTATGCAAAGGGTCGAG 2003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494223795481720