Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1270 89.7 8e-13 >seq1270 Length=21014 Score = 89.7 bits (98), Expect = 8e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 |||| ||||| |||||||||||||| | ||| || || ||||| |||| ||||| || Sbjct 10477 AACATAAGGCAGGCAAAGTCGCAGTGTAATCCTTCATCACGAGAAATGAGTTCGTTTGAG 10418 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | || || ||||| | ||||| || ||||| ||||||| |||||| ||| Sbjct 10417 AATGTCAGACCAGGCATAAGGCCACGTTTCTTAAGCCAGAAAATGGAAGCAAAACTTCCG 10358 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 || || || || || || ||||| ||||| || Sbjct 10357 CTGAAGAAAATTCCTTCGACGGCAGCAAATGC 10326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794352520643920