Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq71022 131 2e-25 >seq71022 Length=3779 Score = 131 bits (144), Expect = 2e-25 Identities = 447/687 (65%), Gaps = 11/687 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||| ||| | ||||| |||||||| ||||||| || || | |||||||| || || Sbjct 1158 TAGACGTTTGATGTGTAAGGTTCAAATGATTCATTGTTTCCGAGAATTTGTGCAGTCGAA 1217 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || |||||||||||||||| | || || | | ||| ||| || | | Sbjct 1218 GCGGTTGGCATTGGTGCCAAAAGTAGGGAATTTCTGATACCTGTTTTGGCAATTTTCTGC 1277 Query 106055 TTGAGAACATCCCAGT--CGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || | ||||||| | | || | | ||||||| | ||||||| ||| | || | Sbjct 1278 TTCAATTCATCCCAATTCCATAAATCTG-TTGGTTTTTTGT-CCCACATGTCATACTGCA 1335 Query 106113 GCACCCCTTGGG-ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171 | |||| | |||| | || ||| | |||||||||| |||| ||| ||| Sbjct 1336 AAATGCCTTTACTAACTGGGC-AGCCTTCATAAGTCTCATAGGTGCCTTCAATTTCGGCC 1394 Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 |||||| || || |||| || | | ||| || || || || || | |||| Sbjct 1395 AATTCAGTACTAGCTTCCAAGGCACCATAATAAATCGTCTCGAAAATTTGTTGGTTCAAT 1454 Query 106232 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCT 106291 | |||||| || || | | ||| || | |||||| |||| || | || Sbjct 1455 AATTGGGCTTCTTCGCTCTCGTAAGGGTAACGCATTAGGATAAATGCATCAGCCATGCCC 1514 Query 106292 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGG 106350 ||||| || | ||||| || | |||| |||||| || ||| || ||| | || Sbjct 1515 TGAACGCCAATTCCAATGGGACGATGTCTCATATTCGATGTTCTAGCT-TCTGGGATCGG 1573 Query 106351 ATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG 106410 |||||| || ||||||| | || | |||||| || || | ||||||| ||| | Sbjct 1574 ATAAAAGTTGACATCAATGATTTTATTCAAATTTTTCGTTACGGTTTTTGTGACTTCTTT 1633 Query 106411 AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGA 106470 | ||| | ||||||| || | || | | | ||| || | | ||| ||||| Sbjct 1634 CAATTTCTTGAAATCAAACGTTT---TTTCATTAGTAACAAACATATTCAAGGCAATTGA 1690 Query 106471 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAA 106530 |||||||| || || || ||||| ||| || || || | ||| ||||||||||| Sbjct 1691 GGCCAAATTACAGACGGCAACTTCATCTTTACTTGAATATTCGACAATCTCTGTACACAA 1750 Query 106531 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTT 106590 |||| | ||||| || || | ||| | ||||||| ||| |||| || || || || Sbjct 1751 GTTGCTGCATTTAATGGTTCCAATATTTTGTTGGTTAGATTTTCTGTTACAAGCGTCTTT 1810 Query 106591 GTAGAGCATGTAGGGCGTCCCCGTCTC 106617 ||||||||| || ||||| ||||| || Sbjct 1811 GTAGAGCATATAAGGCGTACCCGTTTC 1837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589385236506680