Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq75026 95.1 1e-14 >seq75026 Length=6543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||||| |||| ||||| | || || ||||| ||||| || | ||||||||| | | Sbjct 6063 CAAAGACTTGGCGTTCCTTTAGGCTATGGAGGCCCTCACGCCGGTTTCTTTGCATGTAAA 6004 Query 158503 GACAAG--TATAAGAGAAAGATACCTGGCAGAATTGTAGGTC-AGTCAGTAGATAGCGAA 158559 | || | |||| || | || || | || | ||| | ||| ||||| || Sbjct 6003 CAAAACCTTGTAAGGCTAA--TGCCAGGTCGTATGATTGGTGTAACCAG-AGATATGGAT 5947 Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 || ||| | |||||||||||||| || || || |||||||| || || | ||||| ||| Sbjct 5946 GGAAATGATGCATACAGATTAGCCCTTCAAACAAGAGAGCAACACATTCGTAGAGATAAA 5887 Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTC 158666 || || ||||| || || || || ||||| || ||||||||||||| Sbjct 5886 GCCACTAGTAATATTTGTACTGCTCAAGCTTTGTTGGCTAATATGTC 5840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587457584365520