Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq41364 95.1 1e-14 >seq41364 Length=3858 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858 ||| | |||||| || |||| || |||||||| | || || | ||||||||||| || Sbjct 2508 CTTTAACGGTTCAACATGATTCAAATAGACGTGGGTATCCCCAATAGTGTGGACAAAATC 2449 Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918 || || || |||||||| ||||| |||||||| || || | | ||| |||||||| Sbjct 2448 GCCGGGGGTAAGTCCGGTGACATGAGCAATCATGTAGGTCAGCAAGGCGTAACTGGCGAT 2389 Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTC 29945 || || || || || || |||||||| Sbjct 2388 ATTGAATGGAACTCCAAGGCCCATGTC 2362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408215427959561