Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_017984.1 Length=46387 Score E Sequences producing significant alignments: (Bits) Value seq17833 84.2 6e-12 >seq17833 Length=32105 Score = 84.2 bits (92), Expect = 6e-12 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 35009 AAAGAAACACTAAAGCCATATTTAGACAATATTGGGCGAACAATGTTTACAATATCTTCC 35068 || || || |||||||||| | || | || || | || || ||||||||||| || Sbjct 26780 AATGACACGCTAAAGCCATGCTCGGATAGAATCGGCTGCACGATTTTTACAATATCCTCT 26839 Query 35069 AATGGCGTATATGTTGTGCTATATGATTTTTTAGTATGAGCAATTACGGGTATTTCTTTG 35128 ||||| | ||||||||||| || ||| || ||||| ||||| || || || | ||| Sbjct 26840 AATGGTGCGTATGTTGTGCTGTAGCTTTTCTTTGTATGCGCAATCACTGGAATCTTTTTA 26899 Query 35129 CTCATTTCTGCAAAGTCATTGTTAAAATCAATTACAGCTTGTTGCGCCATAACTTCTTTT 35188 |||| | ||||| | ||||| | || | ||||| ||| ||| | |||||| Sbjct 26900 GACATTAAAGAGAAGTCGTGATTAAAGTTGATAATCGCTTGCTGCTTCATGATGTCTTTT 26959 Query 35189 TGCATT 35194 |||||| Sbjct 26960 TGCATT 26965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148174565764666