Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1270 87.8 3e-12 >seq1270 Length=21014 Score = 87.8 bits (96), Expect = 3e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||||||||| | ||| || ||||| || || ||||| |||| ||||| || Sbjct 10469 GCAGGCAAAGTCGCAGTGTAATCCTTCATCACGAGAAATGAGTTCGTTTGAGAATGTCAG 10410 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||| | || | | || ||||||||||| | || ||| || |||||| Sbjct 10409 ACCAGGCATAAGGCCACGTTTCTTAAGCCAGAAAATGGAAGCAAAACTTCCGCTGAAGAA 10350 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG- 48308 || || || || || || || || | | | |||||| || |||||| || ||| Sbjct 10349 AATTCCTTCGACGGCAGCAAATGCTATAATGCGTTCTCCGTAATTGGCGTTC-TGACTGC 10291 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 | ||||| || ||||| || |||||||| |||| ||||| | ||||| Sbjct 10290 ATATCCATTGAATAGCCCAATCGGCCTTCTTTTTGACACATGGAAGGGTCTC 10239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930592452570880