Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq75026 93.3 5e-14 >seq75026 Length=6543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || ||| || | | | |||||||| || | || ||||| || || || || Sbjct 5816 CCATGGTAAATTGCGTACATTGCGGACATATTAGCCAACAAAGCTTGAGCAGTACAAATA 5875 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 ||||| || ||||| ||||| | ||| || |||||||| ||||| || |||||||||||| Sbjct 5876 TTACTAGTGGCTTTATCTCTACGAATGTGTTGCTCTCTTGTTTGAAGGGCTAATCTGTAT 5935 Query 139392 GCAGGATTGCCTTC 139405 ||| ||| || || Sbjct 5936 GCATCATTTCCATC 5949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578413922827640