Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq71022 120 4e-22 >seq71022 Length=3779 Score = 120 bits (132), Expect = 4e-22 Identities = 443/687 (64%), Gaps = 9/687 (1%) Strand=Plus/Minus Query 75905 GAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAG 75964 || || || || || |||||||| ||||| || |||||||||| || ||||||| | Sbjct 1837 GAAACGGGTACGCCTTATATGCTCTACAAAGACGCTTGTAACAGAAAATCTAACCAACAA 1778 Query 75965 AATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG 76024 ||| | ||||| || || || || | || || || ||| | || || || ||| Sbjct 1777 AATATTGGAACCATTAAATGCAGCAACTTGTGTACAGAGATTGTCGAATATTCAAGTAAA 1718 Query 76025 GATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAG 76084 ||||| || || || |||||||| ||||| ||| | | || ||| | | | || Sbjct 1717 GATGAAGTTGCCGTCTGTAATTTGGCCTCAATTGCCTTGAATATGTTTGTTACTAATGAA 1658 Query 76085 ACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTA 76144 | || ||||||| | ||| | | ||| ||||||| | || || |||||| | Sbjct 1657 AAA---ACGTTTGATTTCAAGAAATTGAAAGAAGTCACAAAAACCGTAACGAAAAATTTG 1601 Query 76145 AACCGAGTCATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGCG 76203 || | ||||||| || |||||||| | ||| || ||| || |||||| | Sbjct 1600 AATAAAATCATTGATGTCAACTTTTATCCGATCCCAGAA-GCTAGAACATCGAATATGAG 1542 Query 76204 ACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTA 76263 ||| | || ||||| | || ||||| || | || |||| |||||| | || || Sbjct 1541 ACATCGTCCCATTGGAATTGGCGTTCAGGGCATGGCTGATGCATTTATCCTAATGCGTTA 1482 Query 76264 CGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCA 76323 | | | || || |||||| | |||| | || || || || || ||| | Sbjct 1481 CCCTTACGAGAGCGAAGAAGCCCAATTATTGAACCAACAAATTTTCGAGACGATTTATTA 1422 Query 76324 CGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 | || |||| || ||| ||||||||| ||| |||| |||||||||| | ||| Sbjct 1421 TGGTGCCTTGGAAGCTAGTACTGAATTGGCCGAAATTGAAGGCACCTATGAGACTTATGA 1362 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT 76443 || | || | |||| | | |||| ||| |||||||| ||||||| | Sbjct 1361 AGGCTGCCCAGTTAGTAAAGGCATTTTGCAGTATGACATGTGGGACAAA-AAACCAA-CA 1304 Query 76444 CAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 | || | | ||||||| | ||| | || | | ||| | | || Sbjct 1303 GATTTATGGAATTGGGATGAATTGAAGCAGAAAATTGCCAAAACAGGTATCAGAAATTCC 1244 Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561 || | |||||||||||||||| || || || |||||||| | || || ||||||| Sbjct 1243 CTACTTTTGGCACCAATGCCAACCGCTTCGACTGCACAAATTCTCGGAAACAATGAATCA 1184 Query 76562 TTTGAACCATACACAACAAACATCTAC 76588 |||||||| |||||| ||||| ||||| Sbjct 1183 TTTGAACCTTACACATCAAACGTCTAC 1157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595967385360160