Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq56742 84.2 4e-12 >seq56742 Length=30591 Score = 84.2 bits (92), Expect = 4e-12 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 26483 AAGG-TTAAAAATGTTAGCTAAAGAACTGCAGGTGCCTATAATTGCTTTATGTCAATTAT 26541 |||| |||||| | |||| |||||| | | | || |||||||||||| ||||||| Sbjct 30163 AAGGATTAAAAGCGATAGCCAAAGAATTAAACATTCCAGTAATTGCTTTATCACAATTAT 30222 Query 26542 CTAGGGCTGTAGAAACTCGTGGTGGTTCTAAACGTCCTTTGTTATCAGATTTGCGTGAAT 26601 |||| ||||| ||| | | | | |||| || |||| || || ||||| |||| Sbjct 30223 CTAGAGCTGTTGAA---CTTAGAGAAGATAAAAAGCCGATGTTGTCTGACTTGCGGGAAT 30279 Query 26602 CAGGTGCAATAGAGCAGGATGCAGATATAGTAGAGTTTATTTATAGACCAGATTATTAT 26660 | || | || || || ||| | ||||||||| |||||| ||| || ||| |||||| Sbjct 30280 CTGGGTCTATTGAACAAGATTCTGATATAGTAATGTTTATCTATCGAGAAGAATATTAT 30338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91822258902948