Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq144 91.5 1e-13 >seq144 Length=14776 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||||||||| || || ||| | || |||| |||| ||| ||||| || || Sbjct 13165 CTCTTTCTGAATGTTATAATCTGACAGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAA 13106 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| |||||||| ||| | || | || ||||| || | || || ||| ||| Sbjct 13105 GATCAAACGTTGCTGATCTGGGGGGATACCTTCCTTATCTTGAATCTTGGCTTTAACGTT 13046 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | ||| || || | || ||||||||||| || | ||||| || Sbjct 13045 TTCAATGGTGTCGGAAGGCTCAACCTCCAATGTAATGGTCTTTCCAGTCAACGTCTTGAC 12986 Query 34966 AAAGATCTGCATG 34978 || || |||||| Sbjct 12985 GAAAATTTGCATG 12973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325372244698583