Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq21274 96.9 5e-15 seq24234 95.1 2e-14 seq41431 91.5 2e-13 seq18999 91.5 2e-13 seq4145 91.5 2e-13 seq65663 89.7 7e-13 seq20332 89.7 7e-13 seq36068 87.8 2e-12 seq28917 87.8 2e-12 seq23277 86.0 8e-12 seq48608 84.2 3e-11 >seq21274 Length=2047 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| || |||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1189 TCCCCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1130 Query 8718 CCCGACGAGGAGCAGA 8733 |||| ||||||| ||| Sbjct 1129 CCCGTCGAGGAGAAGA 1114 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||| || |||||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 1191 AGTCCCCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 1132 Query 11787 TCCCCGACGAGGAG 11800 |||||| ||||||| Sbjct 1131 TCCCCGTCGAGGAG 1118 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||||||| |||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 1118 CTCCTCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1177 Query 139413 TACTAACGAGGATTT 139427 ||||| || ||| || Sbjct 1178 TACTATCGGGGACTT 1192 >seq24234 Length=2149 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| || |||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 775 TCCCCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 716 Query 8718 CCCGACGAGGAG 8729 |||| ||||||| Sbjct 715 CCCGTCGAGGAG 704 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||| || |||||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 777 AGTCCCCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 718 Query 11787 TCCCCGACGAGGAGG 11801 |||||| |||||||| Sbjct 717 TCCCCGTCGAGGAGG 703 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 ||||||| |||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 704 CTCCTCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 763 Query 139413 TACTAACGAGGATTT 139427 ||||| || ||| || Sbjct 764 TACTATCGGGGACTT 778 >seq41431 Length=3534 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||| || Sbjct 336 AGTCCTCGATAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 277 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || ||||| Sbjct 276 TCCCCGTCGGGGAGG 262 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 334 TCCTCGATAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 275 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 274 CCCGTCGGGGAG 263 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 263 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 322 Query 139413 TACTAACGAGGATTT 139427 ||||| |||||| || Sbjct 323 TACTATCGAGGACTT 337 >seq18999 Length=1928 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 932 AGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 991 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || ||||| Sbjct 992 TCCCCGTCGGGGAGG 1006 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 934 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 993 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 994 CCCGTCGGGGAG 1005 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1005 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 946 Query 139413 TACTAACGAGGATTT 139427 ||||| |||||| || Sbjct 945 TACTATCGAGGACTT 931 >seq4145 Length=2785 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 2095 AGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 2154 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || ||||| Sbjct 2155 TCCCCGTCGGGGAGG 2169 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 2097 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 2156 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 2157 CCCGTCGGGGAG 2168 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 2168 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2109 Query 139413 TACTAACGAGGATTT 139427 ||||| |||||| || Sbjct 2108 TACTATCGAGGACTT 2094 >seq65663 Length=6885 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 482 AGTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 423 Query 11787 TCCCCGACGAGGAG 11800 |||||| || |||| Sbjct 422 TCCCCGTCGGGGAG 409 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 480 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 421 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 420 CCCGTCGGGGAG 409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||| Sbjct 407 AACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 466 Query 139411 TATACTAACGAGGATTTT 139428 ||||||| |||||| ||| Sbjct 467 TATACTATCGAGGACTTT 484 >seq20332 Length=1572 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 1074 AGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 1133 Query 11787 TCCCCGACGAGGAG 11800 |||||| || |||| Sbjct 1134 TCCCCGTCGGGGAG 1147 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1076 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1135 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1136 CCCGTCGGGGAG 1147 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | |||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1147 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1088 Query 139413 TACTAACGAGGATTT 139427 ||||| |||||| || Sbjct 1087 TACTATCGAGGACTT 1073 >seq36068 Length=2326 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||| || Sbjct 2208 AGTCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCAAT 2149 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || ||||| Sbjct 2148 TCCCCGTCGGGGAGG 2134 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||| |||| Sbjct 942 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCAATTC 883 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 882 CCCGTCGGGGAG 871 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||| |||| Sbjct 2206 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCAATTC 2147 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 2146 CCCGTCGGGGAG 2135 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||| |||| Sbjct 942 TCCTCGATAGTATAGTGGTCAGTATCCCCGCCTGTCACGTGGGAGACCGGGGTTCAATTC 883 Query 11789 CCCGACGAGGAGG 11801 |||| || ||||| Sbjct 882 CCCGTCGGGGAGG 870 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| | ||||||||||||||| | |||| |||||||| | ||||||| Sbjct 871 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 930 Query 139413 TACTAACGAGGATTT 139427 ||||| ||||||||| Sbjct 931 TACTATCGAGGATTT 945 >seq28917 Length=2944 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| || ||||||||| ||||| |||| ||||| | |||||||||||||||| || Sbjct 1191 AGTCCTCGATACTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAAT 1250 Query 11787 TCCCCGACGAGGAGG 11801 |||||| || ||||| Sbjct 1251 TCCCCGTCGGGGAGG 1265 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| || ||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1193 TCCTCGATACTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1252 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 1253 CCCGTCGGGGAG 1264 >seq23277 Length=1262 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 205 GTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 264 Query 11788 CCCCGACGAGGAGG 11801 |||| || ||||| Sbjct 265 GCCCGTCGGGGAGG 278 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 206 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTG 265 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 266 CCCGTCGGGGAG 277 >seq48608 Length=6774 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 3771 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 3830 Query 8718 CCCG 8721 |||| Sbjct 3831 CCCG 3834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652185777656080