Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq16360 91.5 2e-13 >seq16360 Length=9505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 140506 CTAATTTTTGTTTAGGAAAACACCTTTCAA--GTGAAAACGATCTTTTAAAAGATCAACG 140563 ||||||| | ||||| ||||| ||| || | ||| | ||| | || | ||||| | Sbjct 4674 CTAATTTCTTCTTAGGCAAACA--TTTGAATCGGGAAGATGATAATCTATACGATCAGAG 4617 Query 140564 CGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATATTTAGGTAAACC 140623 || |||||| |||||||| || ||||| | | || || ||||| || ||||| Sbjct 4616 AGGTAGTCCCGCTTATATTTCACCTGATGTCTTGGGTGGAAAGCCATACAAGGGGAAACC 4557 Query 140624 GTCTGATATGTGGGCGCTTGGAGTAACATTGTATACCATGTTGTTTGGGCAATTTCCATT 140683 || ||||||||||| | || ||| || ||||||||| | || || |||||||||| Sbjct 4556 ATCAGATATGTGGGCATTAGGGGTAGTTTTATATACCATGATTTTCGGCAAATTTCCATT 4497 Query 140684 TTATGATGCGTCTCCAACAGAGCTCTTTAGAAAAAT 140719 | ||| || | ||||| | || |||| ||||| Sbjct 4496 TGTAGATACGACGCCAACGGCTCTGTTTAAGAAAAT 4461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703871150489040