Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1270 82.4 8e-11 >seq1270 Length=21014 Score = 82.4 bits (90), Expect = 8e-11 Identities = 100/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG-TGCT 60038 |||| | ||||| ||||| ||| |||||||| |||||| || ||| || | | Sbjct 10315 AACGCATTATAGCATTTGCTGCCGTCGAAGGAATTTTCTTCAGCGGAA-GTTTTGCTTCC 10373 Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 ||||||||||| || || |||||||| ||||| || |||| ||||| ||||| || ||| Sbjct 10374 ATTTTCTGGCTTAAGAAACGTGGCCTTATGCCTGGTCTGACATTCTCAAACGAACTCATT 10433 Query 60099 TCCCGGGACGAGGG 60112 || || || || || Sbjct 10434 TCTCGTGATGAAGG 10447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547971084784080