Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq66901 82.4 8e-11 seq52454 82.4 8e-11 >seq66901 Length=4174 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57449 AAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAACTGAGCTA 57506 ||||||||||||||| ||||| |||||||||| |||| ||||||||||| |||||||| Sbjct 3285 AAGGATTCGAACCTTTGACCTACGGATTAGAAATCCGTTGCTCTATCCAGCTGAGCTA 3342 >seq52454 Length=6553 Score = 82.4 bits (90), Expect = 8e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57449 AAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAACTGAGCTA 57506 ||||||||||||||| ||||| |||||||||| |||| ||||||||||| |||||||| Sbjct 590 AAGGATTCGAACCTTTGACCTACGGATTAGAAATCCGTTGCTCTATCCAGCTGAGCTA 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531536491653560