Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_029067.1 Length=138234 Score E Sequences producing significant alignments: (Bits) Value seq66901 89.7 5e-13 seq52454 89.7 5e-13 >seq66901 Length=4174 Score = 89.7 bits (98), Expect = 5e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 7339 GCACCCTTAGCACAATTGGATAGTGCAACGGAGTTCTAATCCGTAGGTTGAAAGTTCGAA 7398 ||||||||||| || ||||||| |||||||| ||||||||||||||| || ||||||| Sbjct 3349 GCACCCTTAGCTCAGCTGGATAGAGCAACGGATTTCTAATCCGTAGGTCAAAGGTTCGAA 3290 Query 7399 TCTTTCAGGGTGTGCCA 7415 || || |||||| |||| Sbjct 3289 TCCTTTAGGGTGCGCCA 3273 >seq52454 Length=6553 Score = 89.7 bits (98), Expect = 5e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 7339 GCACCCTTAGCACAATTGGATAGTGCAACGGAGTTCTAATCCGTAGGTTGAAAGTTCGAA 7398 ||||||||||| || ||||||| |||||||| ||||||||||||||| || ||||||| Sbjct 654 GCACCCTTAGCTCAGCTGGATAGAGCAACGGATTTCTAATCCGTAGGTCAAAGGTTCGAA 595 Query 7399 TCTTTCAGGGTGTGCCA 7415 || || |||||| |||| Sbjct 594 TCCTTTAGGGTGCGCCA 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441774394685680