Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq41364 104 2e-17 >seq41364 Length=3858 Score = 104 bits (114), Expect = 2e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 118471 GGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGT 118530 || |||| ||||||| |||||| || | ||||||||| || || | || || || || Sbjct 2501 GGTTCAACATGATTCAAATAGACGTGGGTATCCCCAATAGTGTGGACAAAATCGCCGGGG 2442 Query 118531 GTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAA 118590 ||||| || || | |||||||||||||| |||| ||| ||| ||||| | ||| || Sbjct 2441 GTAAGTCCGGTGACATGAGCAATCATGTAGGTCAGCAAGGCGTAACTGGCGATATTGAAT 2382 Query 118591 GGAACACCCAGACCCATGTCTGCTG 118615 ||||| || || |||||||| |||| Sbjct 2381 GGAACTCCAAGGCCCATGTCGGCTG 2357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414068861182948