Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq144 132 1e-25 seq36344 98.7 2e-15 seq31860 96.9 8e-15 >seq144 Length=14776 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210902 TAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATC 210961 |||||| | ||| || || || |||||||| || || ||||| | ||||| |||||| Sbjct 10759 TAGGACCAAGTGTAGCGTCGATTCTTTTTGAATATTGTAATCGGATAGGGTATGTCCATC 10700 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||||| ||||| || ||||| || ||||||||||| || || || | ||||||||| || Sbjct 10699 TTCCAATTGCTTTCCAGCGAAAATGAGGCGTTGTTGATCTGGTGGGATTCCTTCCTTATC 10640 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 || ||||| ||| | ||||| |||| ||||| | |||||| || | ||| || || Sbjct 10639 TTGAATCTTGGTTTTAATATTTTCAATGGAATCAGACCCTTCAACTTCTAAAGTTATGGT 10580 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | || || ||||| | ||||| Sbjct 10579 TTTACCGGTCAATGTTTTGACAAAGATTTGCAT 10547 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| ||||| ||||| || || | | ||| | ||||||||||| ||||| || Sbjct 13738 GTCGACTCCTTTTGAATGTTGTAGTCTGACAAGGTACGTCCATCTTCCAATTGCTTTCCA 13679 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || || |||||||| || ||||||| ||||| ||||| |||||||| || Sbjct 13678 GCGAAAATGAGACGTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTGGCCTTA 13619 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 |||||||| || || || ||| || || || | |||||| || ||||| || | || Sbjct 13618 ACGTTTTCAATAGTATCCGAGGGCTCGACTTCCAAAGTGATGGTTTTTCCTGTCAATGTT 13559 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | |||||| Sbjct 13558 TTAACAAAAATCTGCAT 13542 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || |||||||| || ||||||||||| | ||||| | ||||||||||| || || || Sbjct 13170 GTCGACTCTTTCTGAATGTTATAATCTGACAGGGTACGTCCATCTTCCAATTGTTTTCCA 13111 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || ||||| | ||||| || || || || | |||||||| || || ||||| ||| Sbjct 13110 GCAAAGATCAAACGTTGCTGATCTGGGGGGATACCTTCCTTATCTTGAATCTTGGCTTTA 13051 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 |||||||| |||||||| || |||||||| | || || |||||||| || | ||| Sbjct 13050 ACGTTTTCAATGGTGTCGGAAGGCTCAACCTCCAATGTAATGGTCTTTCCAGTCAACGTC 12991 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 12990 TTGACGAAAATTTGCAT 12974 Score = 123 bits (136), Expect = 6e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | || || | || | || |||||||| || || || || || | | Sbjct 12970 TCCACGAAGACGGAGAACCAAATGCAATGTAGACTCTTTCTGAATATTGTAGTCGGACAA 12911 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | ||| ||||||| |||||| || || ||||| | || || ||||| || |||| Sbjct 12910 GGTACGTCCGTCTTCCAACTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGAAT 12851 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||| ||||||||||| || ||||| ||||| || ||||| || ||||| Sbjct 12850 ACCTTCCTTATCCTGGATCTTAGCCTTTACGTTCTCGATCGTATCAGATGGCTCGACCTC 12791 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | |||||| ||||| || || | ||||| || || | ||||||| Sbjct 12790 CAAAGTGATGGTCTTACCAGTCAATGTCTTGACGAATATCTGCATT 12745 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983 |||||||| ||||| || || | ||||| | ||| ||||||| ||||| || ||||| Sbjct 7512 TCTTTTTGAATGTTGTAGTCAGATAGGGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAA 7571 Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTT 211043 || ||||||||||| || ||||||| ||||||||| || || ||||| || || || Sbjct 7572 ATGAGGCGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTAACATTC 7631 Query 211044 TCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 || |||| ||||| | |||||| || | || || || || || || | || || ||| Sbjct 7632 TCAATGGAATCAGAACCTTCAACTTCTAAGGTTATGGTTTTACCGGTCAATGTTTTGACA 7691 Query 211104 AACACCTGCAT 211114 || | ||||| Sbjct 7692 AAGATTTGCAT 7702 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || | ||| |||||||| || ||||| || || | | || | ||||||| Sbjct 13525 AGGACCAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 13466 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| || || || ||||| || | || || || || ||||||| ||||| ||||| Sbjct 13465 TCCAATTGTTTTCCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTGTCT 13406 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||||||| || || || || ||| || || | |||||||| Sbjct 13405 TGGATCTTAGCTTTCACGTTTTCAATAGTATCCGAAGGTTCGACTTCCAATGTGATCGTT 13346 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || | || || || || | ||||| Sbjct 13345 TTTCCGGTTAAGGTTTTGACGAAAATTTGCAT 13314 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| ||||| || || || || | | || | |||||||||| || || || Sbjct 14650 GTCGACTCCTTTTGAATATTGTAGTCGGACAAAGTGCGGCCATCTTCCAATTGTTTACCG 14591 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | || || || || ||||||| ||||| |||||||||||||| || Sbjct 14590 GCGAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTA 14531 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 |||||||| ||||| || ||| ||||| || | ||||| || || || || | ||| Sbjct 14530 ACGTTTTCAATGGTATCTGAGGGCTCAACTTCCAAGGTGATAGTTTTGCCAGTCAAAGTT 14471 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 14470 TTAACGAAAATCTGCAT 14454 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| |||||||| || || || | | || | |||||||| | || || ||| Sbjct 13966 GTCGACTCCTTTTGGATATTGTAGTCAGACAAAGTACGGCCATCTTCTAATTGTTTTCCT 13907 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | || ||||| || || || | |||||||| ||||||||||| || Sbjct 13906 GCGAAAATCAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCCTGGATCTTGGCCTTA 13847 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| |||||||| || ||| || || || | ||||| || || || || | ||| Sbjct 13846 ACGTTCTCGATGGTATCCGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTCAATGTC 13787 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 13786 TTGACGAAGATTTGCAT 13770 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || |||||||||||||| || || || | | || | |||||||||| ||||| || Sbjct 14194 GTCGACTCTTTTTGGATATTGTAGTCAGACAATGTGCGGCCATCTTCCAATTGCTTTCCA 14135 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 ||||| || | || ||||| || ||||| | |||||||| || || || || || Sbjct 14134 GCGAAAATCAAACGCTGTTGATCTGGAGGGATGCCTTCCTTATCTTGAATTTTAGCCTTT 14075 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| ||||| || ||| || || || | ||||| || || || || | || Sbjct 14074 ACATTTTCAATGGTATCCGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTTAAGGTT 14015 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 14014 TTCACGAAGATTTGCAT 13998 >seq36344 Length=11671 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || || || |||||||| || || | | ||| | ||| ||||| || |||||||| Sbjct 872 GTTGATTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCGTCTTCGAGTTGCTTGCCA 813 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | ||||||||||| || || | |||||| ||||| || || || ||| Sbjct 812 GCAAAAATCAAACGTTGTTGGTCTGGGGGGATTCCTTCTTTGTCTTGAATTTTAGCTTTT 753 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || || || || ||||| || ||| || || | || || || ||||| || | |||| Sbjct 752 ACATTCTCAATTGTGTCTGACGGTTCGACTTCCAATGTAATAGTTTTTCCAGTCAAAGTC 693 Query 211098 TTTACAAACACCTGCAT 211114 || || || | ||||| Sbjct 692 TTGACGAATATTTGCAT 676 Score = 87.8 bits (96), Expect = 4e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| | |||||| || || |||||||| || || || || | | || Sbjct 668 CGAAGACGAAGGACCAAGTGAAGCGTAGATTCTTTTTGAATATTGTAGTCAGACAAAGTA 609 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||| | || || || ||||| || | || ||||| || || |||| ||| Sbjct 608 CGGCCATCTTCTAATTGTTTTCCGGCGAAAATCAAACGCTGTTGATCTGGTGGAATACCT 549 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGT 211051 ||||| ||||||||||| || || ||||| ||||| Sbjct 548 TCCTTATCCTGGATCTTGGCCTTTACATTTTCAATGGT 511 >seq31860 Length=14314 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||||||| | || | |||||||||||||| ||||| || || ||| || | || Sbjct 1277 TCTTAGGACCAAATGCAATGTGGACTCTTTTTGAATGTTGTAGTCGCTAAGTGTTTTGCC 1218 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || ||||| || || || | | ||| || || || || | ||||| || Sbjct 1217 ATCTTCCAATTGTTTGCCAGCAAAAATCAATCTTTGCTGATCTGGTGGGATGCCTTCTTT 1158 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||||| ||||| ||| || ||||| || | || |||| ||| | || || || || Sbjct 1157 ATCCTGAATCTTCAATTTGACATTTTCAATAGAATCTGAGCCCTCAGCTTCAAGTGTTAT 1098 Query 211079 CGTCTTTCCCGTGAGAGTCTT 211099 || ||||| || || || || Sbjct 1097 TGTTTTTCCGGTTAGGGTTTT 1077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157952626512305