Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq41364 87.8 1e-12 >seq41364 Length=3858 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 29650 CGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG 29709 |||||| || || | | |||||||| | ||| || | ||||||||||| || || || Sbjct 2502 CGGTTCAACATGATTCAAATAGACGTGGGTATCCCCAATAGTGTGGACAAAATCGCCGGG 2443 Query 29710 TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAA 29769 || |||||||| ||||| |||||||| || || | | ||| |||||||| || || Sbjct 2442 GGTAAGTCCGGTGACATGAGCAATCATGTAGGTCAGCAAGGCGTAACTGGCGATATTGAA 2383 Query 29770 GGGCACCCCGAGCCCCATGTC 29790 || || || || |||||||| Sbjct 2382 TGGAACTCCAAGGCCCATGTC 2362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405763443643702