Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq66901 111 2e-19 seq52454 111 2e-19 >seq66901 Length=4174 Score = 111 bits (122), Expect = 2e-19 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 |||||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||||| Sbjct 3271 AATGGCGCACCCTAAAGGATTCGAACCTTTGACCTACGGATTAGAAATCCGTTGCTCTAT 3330 Query 66461 CCAGCTGAGCTAAGAGTGC 66479 |||||||||||||| |||| Sbjct 3331 CCAGCTGAGCTAAGGGTGC 3349 >seq52454 Length=6553 Score = 111 bits (122), Expect = 2e-19 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 66401 AATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTAT 66460 |||||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||||| Sbjct 576 AATGGCGCACCCTAAAGGATTCGAACCTTTGACCTACGGATTAGAAATCCGTTGCTCTAT 635 Query 66461 CCAGCTGAGCTAAGAGTGC 66479 |||||||||||||| |||| Sbjct 636 CCAGCTGAGCTAAGGGTGC 654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521588144284920