Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq66901 87.8 2e-12 seq52454 87.8 2e-12 >seq66901 Length=4174 Score = 87.8 bits (96), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 362 AAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAGCTGAGCTA 419 ||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||| Sbjct 3285 AAGGATTCGAACCTTTGACCTACGGATTAGAAATCCGTTGCTCTATCCAGCTGAGCTA 3342 >seq52454 Length=6553 Score = 87.8 bits (96), Expect = 2e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 362 AAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAGCTGAGCTA 419 ||||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||| Sbjct 590 AAGGATTCGAACCTTTGACCTACGGATTAGAAATCCGTTGCTCTATCCAGCTGAGCTA 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539352593618960