Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq144 113 3e-20 seq36344 86.0 5e-12 seq3660 86.0 5e-12 >seq144 Length=14776 Score = 113 bits (124), Expect = 3e-20 Identities = 143/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || ||||| ||||| | || || | || |||| || || || ||||| Sbjct 13165 CTCTTTCTGAATGTTATAATCTGACAGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAA 13106 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG- 44264 ||||||||| |||||||||| || | ||||||||| || ||||| |||| || | Sbjct 13105 GATCAAACGTTGCTGATCTGGGGGGATACCTTCCTTATCTTGAATCTT-GGCTTTAACGT 13047 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | |||||||||| | || ||||||| ||||| |||||||| || | ||||| | Sbjct 13046 TTTCAATGGTGTCGGAAGGCTCAACCTCCAATGTAATGGTCTTTCCAGTCAACGTCTTGA 12987 Query 44325 CGAAGATTTGCATG 44338 |||| ||||||||| Sbjct 12986 CGAAAATTTGCATG 12973 Score = 102 bits (112), Expect = 6e-17 Identities = 148/204 (73%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 ||| || || || ||||| |||| | || | || |||| |||| |||||| || |||| Sbjct 12937 CTCTTTCTGAATATTGTAGTCGGACAAGGTA-CGTCCGTCTTCCAACTGCTTTCCAGCAA 12879 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||||||||||||||| |||| || | ||||||||| ||| ||||| || | | | Sbjct 12878 AGATCAAACGCTGCTGGTCTGGTGGAATACCTTCCTTATCCTGGATCTT-AGCCTTTACG 12820 Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 ||| | || || || | | || ||||||| || || ||||| || || | ||||| Sbjct 12819 TTCTCGATCGTATCAGATGGCTCGACCTCCAAAGTGATGGTCTTACCAGTCAATGTCTTG 12760 Query 44324 ACGAAGATTTGCATGATGTGAATG 44347 ||||| || ||||| ||| |||| Sbjct 12759 ACGAATATCTGCATTCTGTAAATG 12736 Score = 100 bits (110), Expect = 2e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||| ||||| || | | | || | || || | || || |||||||| Sbjct 14417 CTCCTTTTGGATATTGTAGTCTGACAATGTACGGCCATCTTCTAATTGTTTGCCGGCAAA 14358 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TG 44264 ||||||||||| ||||||| ||| | ||||||||| | | | | || |||| || Sbjct 14357 AATCAAACGCTGTTGATCTGGAGGGATACCTTCCTTAT-CTTGAATTTTAGCTTTAACAT 14299 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | || || || |||| || || || || || || | ||| |||| Sbjct 14298 TTTCGATTGTGTCCGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTTAAGGTTTTCA 14239 Query 44325 CGAAGATTTGCATG 44338 |||||||||||||| Sbjct 14238 CGAAGATTTGCATG 14225 Score = 96.9 bits (106), Expect = 2e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| |||||||| ||||| || | | | ||| | || |||| ||||| || || || Sbjct 14189 CTCTTTTTGGATATTGTAGTCAGACAATGTGCGGCCATCTTCCAATTGCTTTCCAGCGAA 14130 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||| ||||||| ||| | |||||||| || || || ||| | | Sbjct 14129 AATCAAACGCTGTTGATCTGGAGGGATGCCTTCCTTATCTTGAATTTTAGCCTTTACATT 14070 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | || || || |||| || || || || || || | ||| ||||| Sbjct 14069 TTCAATGGTATCCGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTTAAGGTTTTCAC 14010 Query 44326 GAAGATTTGCATG 44338 ||||||||||||| Sbjct 14009 GAAGATTTGCATG 13997 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||| || ||||| |||| | ||| | || |||| || || ||||| || Sbjct 14645 CTCCTTTTGAATATTGTAGTCGGACAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAA 14586 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||||||||||| ||| | |||||| || ||| ||||| ||| | | Sbjct 14585 AATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTAACGTT 14526 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | || || || |||| || || || || || || | || || || Sbjct 14525 TTCAATGGTATCTGAGGGCTCAACTTCCAAGGTGATAGTTTTGCCAGTCAAAGTTTTAAC 14466 Query 44326 GAAGATTTGCATG 44338 ||| || |||||| Sbjct 14465 GAAAATCTGCATG 14453 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||| ||||| || | | || | || || | || || || || || Sbjct 13961 CTCCTTTTGGATATTGTAGTCAGACAAAGTACGGCCATCTTCTAATTGTTTTCCTGCGAA 13902 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||||||||| ||||||| || | ||||||||| ||| ||||| ||| || || Sbjct 13901 AATCAAACGCTGTTGATCTGGTGGGATACCTTCCTTATCCTGGATCTTGGCCTT-AACGT 13843 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | ||||| || | || || || |||| || || || || || || | ||||| | Sbjct 13842 TCTCGATGGTATCCGAGGGCTCGACTTCCAAGGTGATGGTTTTGCCAGTCAATGTCTTGA 13783 Query 44325 CGAAGATTTGCAT 44337 ||||||||||||| Sbjct 13782 CGAAGATTTGCAT 13770 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| || || || || || ||||||||||||||||||| ||| | |||||| || Sbjct 13468 TCTTCCAATTGTTTTCCAGCGAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCTTTG 13409 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 || ||||| |||| || | || || || | | ||| || |||| || ||| Sbjct 13408 TCTTGGATCTTAGCTTTCACGTTTTCAATAGTATCCGAAGGTTCGACTTCCAATGTGATC 13349 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || | ||| || ||||| |||||||| Sbjct 13348 GTTTTTCCGGTTAAGGTTTTGACGAAAATTTGCAT 13314 >seq36344 Length=11671 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||| ||||||||||| |||| | || | || |||| || || ||||| || ||||| Sbjct 866 TCCTTCTGGATGTTGTAGTCGGACAAGGT-ACGTCCGTCTTCGAGTTGCTTGCCAGCAAA 808 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||||| || || |||| || | |||| |||| | | | || |||| | | Sbjct 807 AATCAAACGTTGTTGGTCTGGGGGGATTCCTT-CTTTGTCTTGAATTTTAGCTTTTACAT 749 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | ||| || |||| ||||| || ||||| || | ||||| | Sbjct 748 TCTCAATTGTGTCTGACGGTTCGACTTCCAATGTAATAGTTTTTCCAGTCAAAGTCTTGA 689 Query 44325 CGAAGATTTGCAT 44337 |||| |||||||| Sbjct 688 CGAATATTTGCAT 676 >seq3660 Length=14069 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| |||||||| ||| | | | | | || |||| || || || ||||| Sbjct 2481 TCCTTTTGAATGTTGTAGTCGCCCAATGTTCTGCCATCTTCCAATTGTTTGCCAGCAAAA 2422 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| || || ||||||| || | |||||||| || ||||| ||| | || Sbjct 2421 ATCAAGCGTTGTTGATCTGGTGGGATTCCTTCCTTCTCTTGAATCTTAGCCTTGACATTT 2362 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || || || | | ||| || |||| || || |||||||| || | ||||| ||| Sbjct 2361 TCAATAGTATCCGAAGCTTCAACTTCCAATGTGATTGTCTTTCCAGTCAAAGTCTTGACG 2302 Query 44327 AAGATTTGCATG 44338 |||||||||||| Sbjct 2301 AAGATTTGCATG 2290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359636088111069