Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq168888 493 2e-134 >seq168888 Length=4095 Score = 493 bits (546), Expect = 2e-134 Identities = 1157/1733 (67%), Gaps = 26/1733 (2%) Strand=Plus/Minus Query 52846 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTT 52905 ||| ||||| || ||||| ||||| | |||| | ||||| || || ||||| ||| Sbjct 3166 ATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTT 3107 Query 52906 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 52965 ||| | || || |||| ||| || || | ||| |||||||| || || || || || Sbjct 3106 ACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACC 3047 Query 52966 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 53025 ||| || |||||||||| || | || || | | ||||||| ||| ||||| | Sbjct 3046 CCTATCGGCAGCCATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAG 2987 Query 53026 -TCGCTTAATATCTTCTGGAA--GGTT-TGTATTCTGAATAGATCCACCATCTACCATAA 53081 || |||| | |||| |||| | || | |||| || || || ||| || || | Sbjct 2986 ATCTCTTATT-TCTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTA 2928 Query 53082 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 53141 | ||| || || || |||| ||| || | | || |||||| | | | | ||| Sbjct 2927 TAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGAT 2868 Query 53142 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 53201 |||| || ||||| || || |||||||| ||||| | ||| ||||| || | | Sbjct 2867 GATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAG 2808 Query 53202 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 53261 |||| | || ||||| || || | ||||||||| || ||||| || |||||||| || | Sbjct 2807 GTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTA 2748 Query 53262 CCAATAAACTATTTCTAAGACCGTATGTTCTGA--TTTTATCTTTTAGAGGTTCCCAATT 53319 |||||| |||||| | ||| ||| | || || | ||||||| || ||||| || Sbjct 2747 ATAATAAAGAATTTCTCAAACC--ATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTT 2690 Query 53320 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA 53379 |||||| || | || ||||| ||||| | ||||| Sbjct 2689 CCAAAGGTCGGTGGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGG 2630 Query 53380 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 53439 |||| | || || || || || | ||| || || ||||||||||| || |||| Sbjct 2629 GCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAG 2570 Query 53440 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATC 53499 ||| ||||||||||||||||| || || | | ||| || | ||| | || || Sbjct 2569 TGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTC 2510 Query 53500 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 53559 | ||| | | | | ||| | ||||||| |||||||||||||| || ||||| Sbjct 2509 ATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGG 2450 Query 53560 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 53619 ||||| ||| |||| || || || || || || ||||| |||||| ||| || || Sbjct 2449 CCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGAT 2390 Query 53620 TTTATTGAGGTTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATT 53678 |||||| | |||| ||| ||| | |||| || || || | ||| ||||| | || Sbjct 2389 TTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATG 2331 Query 53679 GTCCATCT--ATTA-CAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 | |||| |||| ||||||||||||| ||||||||||| | |||||| || || || | Sbjct 2330 TTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTT 2271 Query 53736 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 | | ||| || |||| | ||||||||||| | |||||||| || || || |||| Sbjct 2270 CGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTA 2211 Query 53796 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAG 53855 | || | ||| ||||| || ||||||| || || || ||||| || | || || || | Sbjct 2210 AGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCG 2151 Query 53856 TTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGC-CT---TTATTATAGAT 53911 |||||| |||| ||| || || |||||||| | || | || || | || | | Sbjct 2150 TTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACA- 2092 Query 53912 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACA 53971 | | ||||||| |||||||| || ||| | ||| || || ||||||||| Sbjct 2091 ---AAACGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAG 2035 Query 53972 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 54031 | | ||||||||||| |||| |||||||| | ||| ||| | | | | ||| Sbjct 2034 TCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACT 1975 Query 54032 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 54091 | ||||||||| ||||| || ||||| | ||| ||| | |||| | || ||| Sbjct 1974 CTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCT 1915 Query 54092 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 54151 || || || || |||||||| || ||||| || | | ||| || | |||||| || || Sbjct 1914 TCTTTGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCT 1855 Query 54152 AAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 54211 || || | | | | |||| || ||||| ||||| || ||||||| ||||| || ||| Sbjct 1854 AAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTG 1795 Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271 || || ||||| || | |||||| | | || || ||| ||||||| || || | |||| Sbjct 1794 TTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATA 1735 Query 54272 TAGCTTCCACTGGCACGAATATTACTAATTGATAGA--CCTATCCCCCCTGCCATTTTAG 54329 || ||| | || | ||| | | | | | || || || || || || ||||| Sbjct 1734 TATGATCCTTTAGCTCTGATA-CAGTGAACG-TGGACTCCGATTCCACCAGCAGATTTAG 1677 Query 54330 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 54389 | || | || ||| ||||||| |||||||| || || || ||||| ||||| |||| Sbjct 1676 ATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAG 1617 Query 54390 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 54449 | |||||||| |||| ||| | || || | || || | ||| || Sbjct 1616 CTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGC 1557 Query 54450 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT 54509 ||||| ||||| |||||||||| || | |||||| || | || || | ||||||| Sbjct 1556 TGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATAT 1497 Query 54510 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 | ||| || || | | || | ||| | ||| ||||| |||| |||| Sbjct 1496 CTTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCA 1444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591888017004240