Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq131719 190 2e-43 seq15021 105 6e-18 seq193007 91.5 1e-13 seq67196 87.8 2e-12 >seq131719 Length=2163 Score = 190 bits (210), Expect = 2e-43 Identities = 340/494 (69%), Gaps = 12/494 (2%) Strand=Plus/Minus Query 105997 GGGTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056 |||||||| ||||| || || || |||||||||||||| || || ||||||||||||||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAA-----ACG-TTTCTTTTTTCAACA 106110 || || || || || || || ||| | || ||| ||| ||| | || ||| Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCA--- 1931 Query 106111 TCGTGCATAAAATAAAATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTT 106170 ||| | |||| | ||||| || | | ||||||||| || | ||||| | ||| || Sbjct 1930 --GTGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTG 1874 Query 106171 AAATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCG 106230 | | || | || ||| | ||||| || || || || ||||| || || ||| Sbjct 1873 AGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCG 1814 Query 106231 TTCCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCA 106290 ||||| | || | || ||||| ||||| || | |||||||| || || ||||||| Sbjct 1813 TTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGAC 1754 Query 106291 ACTTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATC 106350 |||||||| |||||||| || |||| || | || | | | || || || ||| Sbjct 1753 ACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATC 1694 Query 106351 GTTTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAG 106410 || || |||||| || || ||||| |||||||| || ||||| || ||||||||| Sbjct 1693 TCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAG 1634 Query 106411 TGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCAC 106470 || | | ||| || | || || ||| ||||| || || | | ||||| ||||| Sbjct 1633 TGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCAT 1574 Query 106471 TCAACAAAGTACGC 106484 || || ||||| || Sbjct 1573 TCTACGAAGTAAGC 1560 >seq15021 Length=1916 Score = 105 bits (116), Expect = 6e-18 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 28953 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 29012 ||| | | |||||| |||||| | ||||| | ||||| || ||||| ||| || | Sbjct 719 AGTTTTACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTG 778 Query 29013 GAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 29072 || | | || || | | || | || || ||| |||||||| ||| | || Sbjct 779 GAGGCTTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCT 838 Query 29073 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCC 29132 ||||||||| || | |||||||| || |||||| ||||||| | || | | Sbjct 839 CCTGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCT 898 Query 29133 GATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||||| ||||||||||||||| |||||||| | | ||||||| Sbjct 899 GATTACAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGG 954 >seq193007 Length=659 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || |||| ||| | || |||||||| || || ||| ||||| | Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || |||||| || ||||||||| | ||| ||| ||| Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || | ||||||||||| || |||||||| |||||| | | ||||| |||| |||| Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CCGACTACA 453 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||| ||||| |||||||| | ||| |||| Sbjct 452 ATATCCAGAAAGAATCTACATTGCACTTGGT 422 >seq67196 Length=1848 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | ||||| ||||| || ||||| || ||| ||| ||||| | Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | | |||| || ||| || ||||||||| | ||| |||||| Sbjct 863 AGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGATCA 804 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || | || || ||||| || || || ||||||| | ||| || | |||||||| Sbjct 803 GCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAA 744 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||| || ||||| ||| | || | || ||||| | || ||||| Sbjct 743 TATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046245903265