Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 244 9e-60
seq174000 104 2e-17
>seq131719
Length=2163
Score = 244 bits (270), Expect = 9e-60
Identities = 401/570 (70%), Gaps = 11/570 (2%)
Strand=Plus/Minus
Query 102470 AGTTCGTCCAGCATGGCGCGCAACTCTTTCAGCAAAACAAGGTACGTGTCGGCGTCGCGC 102529
|| |||| || ||| |||||| || |||| || || | ||| | || |||| |
Sbjct 2122 AGCTCGTTCAACATCTCGCGCAGTTCCTTCATCAGAAGTACGTAGATTTCTCCGTC---C 2066
Query 102530 TCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAATCGATGTCC 102589
| | ||||||| ||||| ||||| || || || || |||||||||||||| ||
Sbjct 2065 TTGGGCCTGCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCG 2006
Query 102590 ACCCCGTCGAAAAACTTCCACACCTGCAAAAACTCTTTAACGGATTCGACAAACACGCGC 102649
|| ||||| || || ||||| ||| | || ||||| ||||| | || || ||| |
Sbjct 2005 ACGCCGTCAAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAA-ACGGTC 1947
Query 102650 -CGCTTGTCCGCGTC-GTGCATGAAATAGAACGGGTCGGACAGCGTCCAGCCGCCAATGG 102707
||||| | ||| ||| | |||| |||| || || | || ||||||||||| | ||
Sbjct 1946 ACGCTTTGTCTTGTCAGTGAA-GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGG 1888
Query 102708 ACGGCAGGATTTTCAAATGCGGGTTTGCCAGCTTGGCCGCCATCAACTGGCCAAAGTTGC 102767
| |||| || || | | || | ||| | || | ||||| ||||| ||||| |
Sbjct 1887 AAGGCAAAATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTC 1828
Query 102768 CTTTGTAGGGCTCGTTCCATGCGGATACGCCCTTTTGCGGCTTTTGTATGGCGGCCCACG 102827
||||||| || |||||||||| || | ||||||||| || || || | |||||||| |
Sbjct 1827 CTTTGTAAGGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGG 1768
Query 102828 GGTCGTGGATAGCGACCTTAAAGTCTGCGCGGCCTTTGCACGAGCGCTGCAGCGCTTCAA 102887
|||| || || | || || |||||| ||||||| |||| || ||||| || || | |
Sbjct 1767 GGTCATGAATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGA 1708
Query 102888 AACTGCCGGGAATGGTCTTGAGCGCGTCGTTTAGCCCGTCGCCGCCGCAAATCGGGATGA 102947
||||||| ||| ||| || |||||| | |||||||| ||||| ||||| ||||
Sbjct 1707 AACTGCCCTCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGA 1648
Query 102948 AGCCGTACAGCAGATGGGACAGGTTGGGCAGCGGCACTTTGTCCACCGGAAA--GCCGCG 103005
| ||||||| || || | ||| ||||| | |||||| |||||| || || || ||
Sbjct 1647 ACCCGTACAACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCG 1588
Query 103006 GCCGTACACGCCCCACTCTACGAAATACGC 103035
| ||||| ||||| |||||||| || ||
Sbjct 1587 G--ATACACTCCCCATTCTACGAAGTAAGC 1560
>seq174000
Length=6590
Score = 104 bits (114), Expect = 2e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 29094 ACCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGT 29153
|||| || ||||||| | |||||| ||| ||| ||||||||| || ||||||||||
Sbjct 2964 ACCATCGTGCGTGTTCTTCCCACGGTATGTCATCGTTTTCCCAATCTTTAAGACCGCCGT 3023
Query 29154 CGCAGCAAAAGCACCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCGGCCA 29213
| || ||||||| |||||||| || || || || |||||||| ||||||||||| |
Sbjct 3024 CACAATAAAAGCATTTGGTCTTGTCACCTTGTCCTGTATAAAAGAAGCCGGCCTCGGCTA 3083
Query 29214 ACTCTTCGGG 29223
| ||||| ||
Sbjct 3084 AATCTTCCGG 3093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420987743636108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |