Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 221 1e-52
seq15021 105 5e-18
seq67196 95.1 1e-14
seq193007 87.8 1e-12
seq131720 82.4 6e-11
>seq131719
Length=2163
Score = 221 bits (244), Expect = 1e-52
Identities = 344/489 (70%), Gaps = 2/489 (0%)
Strand=Plus/Minus
Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823
|||||||| ||||| || || || || |||||||||| ||||| || ||||| ||||||
Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988
Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGTTTCTTTTTTCAACGTC-GTG 97882
|| || | || || || || || | || ||| || | ||| ||| |||
Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928
Query 97883 CATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATG 97942
| |||| |||| || || | || ||||||||| || | ||||| | ||| || || |
Sbjct 1927 AA-GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTC 1869
Query 97943 TGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCA 98002
||| | || |||| | ||||| ||| || || || |||||||| |||||||||||
Sbjct 1868 TGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCA 1809
Query 98003 AGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTT 98062
| || | ||||||||| ||||| || | |||||||| || || || |||| |||||
Sbjct 1808 TGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTT 1749
Query 98063 GAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTT 98122
||| |||||||| || ||||| || || || || || | ||||| || || ||
Sbjct 1748 GAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTT 1689
Query 98123 GAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGA 98182
|| |||||| || || ||||| |||||||| || ||||| |||||||||||||| |
Sbjct 1688 CAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGT 1629
Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242
| ||| || | || || ||| ||||| || | | | ||||| ||||| || ||
Sbjct 1628 CAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTAC 1569
Query 98243 AAAGTACGC 98251
||||| ||
Sbjct 1568 GAAGTAAGC 1560
>seq15021
Length=1916
Score = 105 bits (116), Expect = 5e-18
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 25026 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 25085
||| | | |||||| |||||| | ||||| | ||||| || ||||| ||| || |
Sbjct 719 AGTTTTACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTG 778
Query 25086 GAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 25145
|| | | || || | | || | || || ||| |||||||| ||| | ||
Sbjct 779 GAGGCTTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCT 838
Query 25146 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCC 25205
||||||||| || | |||||||| || |||||||||||||| | || | |
Sbjct 839 CCTGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCT 898
Query 25206 GATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|||||||||||||| || ||||||||||||||| |||||||| | | |||||||
Sbjct 899 GATTACAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGG 954
>seq67196
Length=1848
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || ||| | ||||| ||||| || ||||| || ||| ||| ||||| |
Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864
Query 25094 AGAGACGGTGGCCGATC--TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
||| || | | || | | |||| || | || || ||||||||| | ||| ||||
Sbjct 863 AGATACTATCGA-GAACGTTAAAGCTAAGA-TTCAGGACAAAGAAGGTATCCCCCCAGAT 806
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| || | || || ||||| || || || |||||||| | ||| || | ||||||
Sbjct 805 CAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTAC 746
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||||||||| ||||| ||| | || | || ||||| | || |||||
Sbjct 745 AATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696
>seq193007
Length=659
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || || |||| ||| | || |||||||| || || ||| ||||| |
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || |||| |||||| || ||||||||| | ||| ||| |||
Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212
|| | ||||||||||| || |||||| | |||||| | | ||||| |||| ||||
Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CCGACTACA 453
Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGT 25243
|||| || || |||||||| | ||| ||||
Sbjct 452 ATATCCAGAAAGAATCTACATTGCACTTGGT 422
>seq131720
Length=1042
Score = 82.4 bits (90), Expect = 6e-11
Identities = 239/366 (65%), Gaps = 8/366 (2%)
Strand=Plus/Minus
Query 97380 ACGCCGGTCCAGCCGCGGCCGTACATGGCGACGCCCACAATTATTTTGTTGGGATCGACG 97439
|| ||||||||||| || ||||||||||| || || || | || || || |||| ||
Sbjct 363 ACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTCTTAGGATTCACA 304
Query 97440 CCTTGTTCCAGTAACGCATCGACAGCGTAATGTGTAGTGTACAGCTCTTCCGAGTTCCAA 97499
||||| ||| || | || || ||| || ||||| ||| | || | ||||
Sbjct 303 CCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAGTCTCCTTCGGCTGCCAA 244
Query 97500 CTTGGCGCGTAGACTGTTGTTTGGTAGCCCAA----ATCCGTGTTTGACCAAGCCCCTTT 97555
||| ||||| | | | |||| | |||| ||| || ||||| || || ||
Sbjct 243 GATGGAGCGTACAGAGAAGCCTGGT-GACCAAGAGTATC---ATTGGACCACGCTCCCTT 188
Query 97556 AAAATCGTAAGTCATGAGAAATATTTTGTCTAATGACTTTTGCGCTTCGGCGTAGTTTAC 97615
|||||||| |||||| ||||| | ||| | | || |||||| || ||| | ||
Sbjct 187 GAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCGCTGTAATCGAC 128
Query 97616 CACGGCAATCTTGTCGTAGCCCGCGCTTATAGCGCTTGTTAATTCGTAAACCCTGCCGGT 97675
|| |||||||| | || || || || || || || ||||| ||| || ||
Sbjct 127 GACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTATTTCCTTCCAGT 68
Query 97676 TTGCACTTCGAGGTCGTCTAGCATTTCGCGCAGCTCATCCAACAACAGAATGTATGTTTT 97735
|| | | ||| |||| | ||| |||||||| || | || || || | ||| |||
Sbjct 67 TTCCGCAGAGAGCTCGTTCAACATCTCGCGCAGTTCCTTCATCAGAAGCACGTAGATTTC 8
Query 97736 GGCGTC 97741
| ||||
Sbjct 7 GCCGTC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409559857843082
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |