Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq131719 221 1e-52 seq15021 105 5e-18 seq67196 95.1 1e-14 seq193007 87.8 1e-12 seq131720 82.4 6e-11 >seq131719 Length=2163 Score = 221 bits (244), Expect = 1e-52 Identities = 344/489 (70%), Gaps = 2/489 (0%) Strand=Plus/Minus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 |||||||| ||||| || || || || |||||||||| ||||| || ||||| |||||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGTTTCTTTTTTCAACGTC-GTG 97882 || || | || || || || || | || ||| || | ||| ||| ||| Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928 Query 97883 CATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATG 97942 | |||| |||| || || | || ||||||||| || | ||||| | ||| || || | Sbjct 1927 AA-GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTC 1869 Query 97943 TGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCA 98002 ||| | || |||| | ||||| ||| || || || |||||||| ||||||||||| Sbjct 1868 TGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCA 1809 Query 98003 AGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTT 98062 | || | ||||||||| ||||| || | |||||||| || || || |||| ||||| Sbjct 1808 TGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTT 1749 Query 98063 GAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTT 98122 ||| |||||||| || ||||| || || || || || | ||||| || || || Sbjct 1748 GAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTT 1689 Query 98123 GAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGA 98182 || |||||| || || ||||| |||||||| || ||||| |||||||||||||| | Sbjct 1688 CAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGT 1629 Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242 | ||| || | || || ||| ||||| || | | | ||||| ||||| || || Sbjct 1628 CAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTAC 1569 Query 98243 AAAGTACGC 98251 ||||| || Sbjct 1568 GAAGTAAGC 1560 >seq15021 Length=1916 Score = 105 bits (116), Expect = 5e-18 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 25026 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 25085 ||| | | |||||| |||||| | ||||| | ||||| || ||||| ||| || | Sbjct 719 AGTTTTACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTG 778 Query 25086 GAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 25145 || | | || || | | || | || || ||| |||||||| ||| | || Sbjct 779 GAGGCTTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCT 838 Query 25146 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCC 25205 ||||||||| || | |||||||| || |||||||||||||| | || | | Sbjct 839 CCTGATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCT 898 Query 25206 GATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||| || ||||||||||||||| |||||||| | | ||||||| Sbjct 899 GATTACAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGG 954 >seq67196 Length=1848 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || ||| | ||||| ||||| || ||||| || ||| ||| ||||| | Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864 Query 25094 AGAGACGGTGGCCGATC--TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 ||| || | | || | | |||| || | || || ||||||||| | ||| |||| Sbjct 863 AGATACTATCGA-GAACGTTAAAGCTAAGA-TTCAGGACAAAGAAGGTATCCCCCCAGAT 806 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || || | || || ||||| || || || |||||||| | ||| || | |||||| Sbjct 805 CAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTAC 746 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||||| ||||| ||| | || | || ||||| | || ||||| Sbjct 745 AATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696 >seq193007 Length=659 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || |||| ||| | || |||||||| || || ||| ||||| | Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || |||| |||||| || ||||||||| | ||| ||| ||| Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || | ||||||||||| || |||||| | |||||| | | ||||| |||| |||| Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CCGACTACA 453 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGT 25243 |||| || || |||||||| | ||| |||| Sbjct 452 ATATCCAGAAAGAATCTACATTGCACTTGGT 422 >seq131720 Length=1042 Score = 82.4 bits (90), Expect = 6e-11 Identities = 239/366 (65%), Gaps = 8/366 (2%) Strand=Plus/Minus Query 97380 ACGCCGGTCCAGCCGCGGCCGTACATGGCGACGCCCACAATTATTTTGTTGGGATCGACG 97439 || ||||||||||| || ||||||||||| || || || | || || || |||| || Sbjct 363 ACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTCTTAGGATTCACA 304 Query 97440 CCTTGTTCCAGTAACGCATCGACAGCGTAATGTGTAGTGTACAGCTCTTCCGAGTTCCAA 97499 ||||| ||| || | || || ||| || ||||| ||| | || | |||| Sbjct 303 CCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAGTCTCCTTCGGCTGCCAA 244 Query 97500 CTTGGCGCGTAGACTGTTGTTTGGTAGCCCAA----ATCCGTGTTTGACCAAGCCCCTTT 97555 ||| ||||| | | | |||| | |||| ||| || ||||| || || || Sbjct 243 GATGGAGCGTACAGAGAAGCCTGGT-GACCAAGAGTATC---ATTGGACCACGCTCCCTT 188 Query 97556 AAAATCGTAAGTCATGAGAAATATTTTGTCTAATGACTTTTGCGCTTCGGCGTAGTTTAC 97615 |||||||| |||||| ||||| | ||| | | || |||||| || ||| | || Sbjct 187 GAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCGCTGTAATCGAC 128 Query 97616 CACGGCAATCTTGTCGTAGCCCGCGCTTATAGCGCTTGTTAATTCGTAAACCCTGCCGGT 97675 || |||||||| | || || || || || || || ||||| ||| || || Sbjct 127 GACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTATTTCCTTCCAGT 68 Query 97676 TTGCACTTCGAGGTCGTCTAGCATTTCGCGCAGCTCATCCAACAACAGAATGTATGTTTT 97735 || | | ||| |||| | ||| |||||||| || | || || || | ||| ||| Sbjct 67 TTCCGCAGAGAGCTCGTTCAACATCTCGCGCAGTTCCTTCATCAGAAGCACGTAGATTTC 8 Query 97736 GGCGTC 97741 | |||| Sbjct 7 GCCGTC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409559857843082