Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq131719 230 2e-55 seq193007 120 3e-22 seq67196 111 1e-19 seq15021 102 7e-17 >seq131719 Length=2163 Score = 230 bits (254), Expect = 2e-55 Identities = 349/492 (71%), Gaps = 6/492 (1%) Strand=Plus/Plus Query 21581 GCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGACAAGGTGCCGGCG 21640 || ||||| || |||||||||||||| | ||| |||||||||| ||| |||||| Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 21641 CCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGGCGACGGCATCAAC 21700 || ||||| | || | | ||||| ||| | ||||| ||||||||||||||||||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 21701 GACGCGCTAAAAACGGTGCCTGGCAGTTTTGAGGCATTGCAACGTTCGTGTGCGGGTCGG 21760 ||| || || | | |||||||| ||||| | || ||||| || || || Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 21761 GCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACAAAAGCCCCAAAAGGGC 21820 | || ||||| ||| | || || || || |||||||| | || || || ||||||||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 21821 GTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACTGATGGCAATGAAGAGG 21880 | || |||||||||||||| |||||||| ||||| || ||||||||| |||| | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 21881 GCCAATCCTCACATTAAAGTGTTCGCATCGATCGGCGGATGGACTCTGTCCGATCCATTT 21940 || | || || | || | || | || ||||||| |||||| || | |||||||| Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 21941 TATCATATGCAC-GAC--GCCGACGTCAGACGGGTGTTTATCGATTCAGTTGAAGAATTT 21997 | | | | ||| ||| | | | | ||| | || | | ||| || |||| || Sbjct 1920 T-TTTTCTTCACTGACAAGACAAAGCGTGACCG--TTTCGTTGCTTCCGTAAAAGACTTC 1976 Query 21998 CTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGGAGTTTCCCGGCGGCAAG 22057 || | || ||||| |||| |||||||||| | |||||||||||||| || || || || Sbjct 1977 CTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAA 2036 Query 22058 GGAGCCAACCCC 22069 || || |||||| Sbjct 2037 GGCGCTAACCCC 2048 >seq193007 Length=659 Score = 120 bits (132), Expect = 3e-22 Identities = 157/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587 |||||||| | |||||| ||||| || || ||||| ||| |||||| |||| ||| | Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGG--ATAGTGTGCGTCCATCTT 479 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || ||||||||||| |||| |||||||| || || || || || || || |||||| Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 |||||| ||| || | || | ||||||| || | || || || | || | ||| Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGT-TCAACTTCTAAAGTGATAGTT 598 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||| || || || || ||||| ||||||||| Sbjct 599 TTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631 >seq67196 Length=1848 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| | || | || | || | || || ||||||||||| |||||||| Sbjct 694 TACCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTG 753 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| || || || | ||| |||||||| | || |||||||||||||| || | Sbjct 754 ACAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGG 813 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || ||||| ||| || |||||| | |||| || || | |||| Sbjct 814 GGATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGA 873 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | |||||| || |||| |||||| || ||||||||||| Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | ||| |||| || | || || |||||||| || || || || Sbjct 238 TACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAG 297 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||| || |||||||||||||| |||| ||||| || ||||| || | Sbjct 298 ATAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCG 357 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||| || ||| || ||| || | ||| | |||||| | ||| | Sbjct 358 GAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAA 417 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || |||| ||||| ||||| |||||||| Sbjct 418 CTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 >seq15021 Length=1916 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | | || ||||||||||| | ||||| ||||| ||||| |||||||| Sbjct 956 TACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAG 897 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| || || | ||||| ||||| |||| | || || ||||| |||| Sbjct 896 AAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAG 837 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| || ||| ||| || ||| || | ||| | ||||| | ||| | Sbjct 836 GAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCA 777 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || || || |||||||| || |||||||| Sbjct 776 CCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432524101823596