Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq131719 149 7e-31 seq194283 111 2e-19 seq179140 111 2e-19 seq131720 107 2e-18 seq73244 104 3e-17 seq185573 102 9e-17 seq125389 100 3e-16 seq36867 100 3e-16 seq73243 98.7 1e-15 seq195790 93.3 5e-14 seq36871 93.3 5e-14 seq140729 89.7 6e-13 >seq131719 Length=2163 Score = 149 bits (164), Expect = 7e-31 Identities = 333/497 (67%), Gaps = 10/497 (2%) Strand=Plus/Plus Query 96463 GGGGCTTATTTTGTAGAATGGGGCGTGTA--CGATCGTAAGTTTCCCGCGGACAAGGTGC 96520 || ||||| || ||||||||||| ||||| ||| | ||||| |||| |||| |||| Sbjct 1557 GGAGCTTACTTCGTAGAATGGGGAGTGTATCCGA--GGAAGTTCCCCGTGGACCGCGTGC 1614 Query 96521 CCATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGCGACGGTA 96580 | || ||||||||||| || | |||||||| || || || || |||||||||||||| | Sbjct 1615 CGATCCCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCA 1674 Query 96581 TCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCG 96640 ||||||||||||| || || | ||| ||| |||| | || || || || Sbjct 1675 TCAACGACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCG 1734 Query 96641 GCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAA 96700 || | || || ||||| || ||| || ||| | | ||||| || ||||| |||| Sbjct 1735 GCCGCGAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAA 1794 Query 96701 AAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTC 96760 | || |||| || || ||||||||| || || || ||||| || ||| || Sbjct 1795 AGGGCCTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATG---ATGT 1851 Query 96761 GCAAACA---TAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGCG 96817 ||||| | || | | || ||||||||| | |||| || ||||| || | Sbjct 1852 TGAAACAGGCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTG 1911 Query 96818 ACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCGGTTCGTG 96877 | || |||| ||| ||| | ||| | || || | || || | || || | Sbjct 1912 ATCCATTCTTTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAG 1971 Query 96878 AATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCG 96937 | ||| | || ||||| || || || || || || ||||| |||||||| || || | Sbjct 1972 ACTTCCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAG 2031 Query 96938 GAAAGGGTGCCAACCCC 96954 | || || || |||||| Sbjct 2032 GTAAAGGCGCTAACCCC 2048 >seq194283 Length=5324 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2210 AAAAATTCACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2269 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 2270 TTACCACTATACTACCGAGGA 2290 >seq179140 Length=1801 Score = 111 bits (122), Expect = 2e-19 Identities = 83/95 (87%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1537 AAAAAGTTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1478 Query 60117 TCACCACTATACTACCGAGGA-TTGAATATATAAC 60150 | |||||||||||||||| || ||| | ||||||| Sbjct 1477 TTACCACTATACTACCGAAGACTTGGA-ATATAAC 1444 >seq131720 Length=1042 Score = 107 bits (118), Expect = 2e-18 Identities = 357/549 (65%), Gaps = 16/549 (3%) Strand=Plus/Plus Query 97124 AATATTTGGATCATGTGTTTTTAATGAGTTACGACTTCAAAGGCGCATGGTCCAACACGG 97183 |||| |||| || | || || ||||| ||||| ||||| || || |||||||| Sbjct 150 AATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTGGTCCAATGATA 209 Query 97184 ATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACGACAAGTACACAA 97243 | | ||||| || | | ||||||| || || ||| | || | || | ||||| | Sbjct 210 CTCTTGGTCACCAGGCTTCTCTGTACGCTCCATCTTGGCAGCCGAAGGAGACTTACACGA 269 Query 97244 CTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGTACCTTCCAACAAAATTGTAGTTG 97303 |||| | | ||| ||| | || | |||| || | | || || ||||| |||| Sbjct 270 CTGATTTCGGCGTGAAATACTTGTTGGCGCAAGGTGTGAATCCTAAGAAGATTGTGGTTG 329 Query 97304 GAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTA-CAAG--AACAATAACG 97360 | || ||||||||||| | || |||| ||||| |||| ||| ||| ||||| | Sbjct 330 GTGTTGCCATGTACGGACGTGGCTGGACCGGTGTCCACGGTTATGAAGGTGACAAT--CC 387 Query 97361 TATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACATGGGAAAACGGTGTCGTCGATT 97420 | || || ||| || || ||||| || |||||||| ||| || | ||||| || || | Sbjct 388 T-TTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAGATGGTGTGGTGGACT 446 Query 97421 ATAGGCAAGTTAACGATTTTAAAAACAGTCCCGCTTACACTTACGCTTACGACAAAGTGG 97480 | || || | ||| || | | | ||| ||| || || |||| Sbjct 447 ACAGAGAAATAGCAGATGATATAGCTGCTGGGAAATGGGAGTACCATTATGATAAGGTGG 506 Query 97481 CCGAGGCGCCGTACGTTTACGGCGGATCCGAAGAGGCGTTG--GATCTGATTTCTTACGA 97538 | | ||||| ||||| | | | |||| | | | ||||| || | ||||| Sbjct 507 CACAAGCGCCATACGTGTTCAG-------GAAG-GCCACCGGAGATCTAATAACGTACGA 558 Query 97539 CGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAGAATAATTTAGGTGGTTT 97598 ||| | || || ||| |||||| | ||||| | | || || || |||||||| Sbjct 559 CGATGCCAGATCAGTTATAGAGAAAGGCAAATACGTCAGAAATAACAAATTGGGTGGTTT 618 Query 97599 GTTTGCATGGGAAATAGATGCCGACAATGGCGATTTGTTAAACGCCATGAACACAGGTCT 97658 ||| || |||||||| || || |||||||| || | || || || ||||||| ||||| Sbjct 619 GTTCGCGTGGGAAATTGACGCGGACAATGGTGACATATTGAATGCTATGAACATGGGTCT 678 Query 97659 GGGCAACAG 97667 ||||| || Sbjct 679 CGGCAATAG 687 >seq73244 Length=4644 Score = 104 bits (114), Expect = 3e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 622 AAAAGATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 563 Query 60118 CACCACTATACTACCGAGGATT 60139 |||||||||||||||| |||| Sbjct 562 GACCACTATACTACCGAAGATT 541 >seq185573 Length=3752 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2119 AAAAAGGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2178 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 2179 TGACCACTATACTACCGAAGA 2199 >seq125389 Length=1651 Score = 100 bits (110), Expect = 3e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 1364 AAAATAATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1305 Query 60118 CACCACTATACTACCGAGGA 60137 |||||||||||||||| || Sbjct 1304 GACCACTATACTACCGAAGA 1285 >seq36867 Length=10933 Score = 100 bits (110), Expect = 3e-16 Identities = 75/86 (87%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| ||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 9780 AAAAAATCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9837 Query 60117 TCACCACTATACTACCGAGGA-TTGA 60141 | |||||||||||||||| || |||| Sbjct 9838 TGACCACTATACTACCGAAGACTTGA 9863 >seq73243 Length=585 Score = 98.7 bits (108), Expect = 1e-15 Identities = 76/89 (85%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 60054 ATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 || ||||| |||| |||| ||||||||||||| ||||||||||||||||||||| | Sbjct 191 ATTAAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 132 Query 60114 TACTCACCACTATACTACCGAGGA-TTGA 60141 |||| |||||||||||||||| || |||| Sbjct 131 TACTGACCACTATACTACCGAAGACTTGA 103 >seq195790 Length=2215 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| | ||||||| ||| ||||||||||||||||||||| |||| Sbjct 1752 AAAAAGATTCTCTCCGGCGGAGAATCGATCCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1693 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 1692 TGACCACTATACTACCGAAGA 1672 >seq36871 Length=889 Score = 93.3 bits (102), Expect = 5e-14 Identities = 77/92 (84%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 60051 TTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||| ||||| ||||| ||| ||||||||||||| ||||||||||||||||||||| Sbjct 511 TTTAAAAAAAAAACTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 568 Query 60111 ACATACTCACCACTATACTACCGAGGA-TTGA 60141 ||||| ||||||||||||| || || |||| Sbjct 569 GGATACTGACCACTATACTACTGAAGACTTGA 600 >seq140729 Length=3088 Score = 89.7 bits (98), Expect = 6e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||| | ||||| |||||||||||| Sbjct 1115 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCTGGGATACTGACCACTATACTA 1056 Query 60131 CCGAGGA 60137 |||| || Sbjct 1055 CCGAAGA 1049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570051662853640