Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq15021 127 3e-24
seq67196 104 3e-17
seq174000 98.7 1e-15
>seq15021
Length=1916
Score = 127 bits (140), Expect = 3e-24
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| || ||||| ||||| || | |||||||||||| ||||| ||||| |||
Sbjct 954 CCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAA 895
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | || || || |||||||| |||||||| ||||||| ||| ||||| ||||||
Sbjct 894 AGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGA 835
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| || ||||||||||| ||| || ||| || ||
Sbjct 834 ATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACC 775
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTTA 146281
||||| ||||| || || || |||| ||||| | |||||| |||||| ||
Sbjct 774 TCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATTGTA 724
>seq67196
Length=1848
Score = 104 bits (114), Expect = 3e-17
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || | ||||| || || | ||||||||| |||||||| ||||| ||||||||
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | || || || || || |||||||||||||||| | |||||||| || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| || || |||||||||| ||| |||
Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACT 875
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|| | ||||| ||||| || || || ||||| | ||| || ||||||
Sbjct 876 TCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923
Score = 91.5 bits (100), Expect = 2e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127
||| | ||| |||||||||||||| ||||| || || || || || | | ||| ||
Sbjct 485 TACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCTTC 544
Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
| |||||| ||||||||||||| ||| ||||| || || || || ||||| ||||||||
Sbjct 545 AAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCTTG 604
>seq174000
Length=6590
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/191 (72%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 23979 GGATTGTGTCATTACTTTTTGAATAAAATCTTTGCCTTTTACAAGTTTAACATAATCACA 24038
|| || ||| | ||| |||| | ||||||| || |||||||| | | ||| ||||
Sbjct 2896 GGCTTCTGTGTTAACTCTTTGGACGTAATCTTTACCCTTTACAAGCTGGAGATAGGCACA 2955
Query 24039 TTTATCAAACCATCTTGCGTGTTGTATCCAAGGA---TCATCGTCTGTTTCCCATTTATT 24095
| | ||||||| |||||||| | ||| || ||||||| ||||||| | ||
Sbjct 2956 TCGACTGAACCATCGTGCGTGTTCTTCCCACGGTATGTCATCGT---TTTCCCAATCTTT 3012
Query 24096 TAAACCACCATCACAATAAAAGCATTTAACTTTATCACTTTTTCCAGTATAAAAGAATCC 24155
| ||| || ||||||||||||||||| || |||| || ||| ||||||||||| ||
Sbjct 3013 AAGACCGCCGTCACAATAAAAGCATTTGGTCTTGTCACCTTGTCCTGTATAAAAGAAGCC 3072
Query 24156 AGCTTCTGCTA 24166
|| || ||||
Sbjct 3073 GGCCTCGGCTA 3083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741230176712960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |