Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq174000 147 2e-30
seq131720 114 1e-20
seq131719 86.0 5e-12
>seq174000
Length=6590
Score = 147 bits (162), Expect = 2e-30
Identities = 324/480 (68%), Gaps = 18/480 (4%)
Strand=Plus/Minus
Query 13160 CGGTCCCGCTCACCCCAAATACGCCCATGAAGCTGCTCGAGTCAAGAGTTTTCACAACTG 13219
|||||| | |||||||||||||| ||||| || || ||| || || | | ||
Sbjct 3175 CGGTCCGGAACACCCCAAATACGCATCGGAAGCCGCCCGCATCAGCAGCTTCAAAGATTG 3116
Query 13220 GCCCCGTTGTATGAAGCAGAGACCCGAGCAGATGGCGGATGCCGGTTTCTTCTACACTGG 13279
||| | | ||| |||| ||| || | | || || ||||| ||||| || || ||
Sbjct 3115 GCCTAGATCTATCCGTCAGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGG 3056
Query 13280 CTACGGTGACAATACAAAGTGCTTCTATTGTGACGGCGGATTGAAAGATTGGGAGCCGGA 13339
| |||||||| || || ||||| |||||||||||||| | ||||||||||| ||
Sbjct 3055 ACAAGGTGACAAGACCAAATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGAAAACGA 2996
Query 13340 AGATGTACCTTGGGAACAGCATGTAAGATGGTTCGACCGTTGCGCCTACGTTCAGCTAGT 13399
|| |||| |||||| | || | | |||||||| || || ||||| | ||||| ||
Sbjct 2995 TGACATACCGTGGGAAGAACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGT 2936
Query 13400 CAAGGGTAGAGACTACGTACAGAAAGTCATCACGGAAGCCTGCGTGTT---ACCCGGTGA 13456
||||||| ||| ||||| || | ||| | ||| ||||||||| || | | | |||
Sbjct 2935 AAAGGGTAAAGATTACGTCCAAAGAGTTAACACAGAAGCCTGCATGATCAATTCTGATGA 2876
Query 13457 GA---ACACTACCGTGTCAACAGCCGCGCCAG-TGTCCGAGCCTATACCTGAGACAAAAA 13512
|| | || | | || | ||| | ||| || |||| || | || ||
Sbjct 2875 GACCGAAGCTTCAGGATCTGCCGCCCCCGCAGCACCCCCAGCC-CCCCCAGCCACGCAAG 2817
Query 13513 TT---GAAAAAG-----AGCCCCAAGTGGAAGATTCGAAACTGTGCAAGATATGCTACGT 13564
|| ||||||| | | || | || ||||| |||||||| || ||||| |||||
Sbjct 2816 TTCCGGAAAAAGAAGAAAATCTCA--TAGACGATTCCAAACTGTGTAAAATATGTTACGT 2759
Query 13565 AGAAGAGTGCATCGTGTGCTTCGTACCGTGCGGTCACGTGGTGGCGTGTGCCAAGTGTGC 13624
| ||| ||| | | || | || ||||| ||||||||||| ||||| ||||||||
Sbjct 2758 TGGAGAACGCAACATAGTATTTATTCCCTGCGGCCACGTGGTGGCTTGTGCGAAGTGTGC 2699
>seq131720
Length=1042
Score = 114 bits (126), Expect = 1e-20
Identities = 281/418 (67%), Gaps = 10/418 (2%)
Strand=Plus/Minus
Query 6371 ATCTCCCTGTAGTCCACCACACCCTCCTCCCAAGTGCCTTTCACTTTACCCGTCGCCACC 6430
|| || ||||||||||||||||| || | |||||| ||||| || |||||| ||
Sbjct 456 ATTTCTCTGTAGTCCACCACACCATCTTGCCAAGTACCTTTAACAGGACCCGTTGCATTG 397
Query 6431 CCACTAAACAGATTGT--TGTTCGTGTAATTCGT-CACACCCGACCACCCCCTGCCGTAC 6487
||| | || |||||| ||| | | ||| ||||| | ||| || | ||||||
Sbjct 396 CCAGTGAAAGGATTGTCACCTTCAT---AACCGTGGACACCGGTCCAGCCACGTCCGTAC 340
Query 6488 ATAGCCACCCCCACCACCAACTTGCCACTGTTCACACTCTGGTTCAACAAACGCCTCAAC 6547
|| || || || ||||| | ||| | ||||||| || |||||| |||
Sbjct 339 ATGGCAACACCAACCACAATCTTCTTAGGATTCACACCTTGCGCCAACAAGTATTTCACG 280
Query 6548 GCAAAGTCTGTGGTGTAGTTTTCGTGGGTTTTCCACGACGGTGGATACAGAGGTGCGTGG 6607
| || || || ||||| | || | | | ||| || || | ||||||| || |||
Sbjct 279 CCGAAATCAGTCGTGTAAGTCTCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGG 220
Query 6608 TAGCCCAGATCCGTCA-TCGACCACGCACCCTTGTAATCGTAGTTCATCACGAAAATGTA 6666
| || ||| ||| | |||||||| |||||| |||||||| |||| | ||| ||||
Sbjct 219 TGACCAAGA-GTATCATTGGACCACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTG 161
Query 6667 GTCGAGATACTGTTGGCACTG-TTTGTAGTCGACCACGTCTATCTTGTCGTAACCACCGC 6725
||| | || | | || ||| |||| ||||| || | |||||||| ||||| | |
Sbjct 160 GTCCATGTA-TTTCTGCGCTGCGCTGTAATCGACGACTTGGATCTTGTCCCAACCAGCAC 102
Query 6726 TGATGGCGCTCGTCAACTGCAATCTCCGGCCCGTCTTCTCCTCCAGCTCGTCCAACAT 6783
||||||| |||||||| || ||| || || | | | ||||||| ||||||
Sbjct 101 TGATGGCAGACGTCAACTCGTATTTCCTTCCAGTTTCCGCAGAGAGCTCGTTCAACAT 44
>seq131719
Length=2163
Score = 86.0 bits (94), Expect = 5e-12
Identities = 194/289 (67%), Gaps = 2/289 (1%)
Strand=Plus/Minus
Query 7048 CATCAGCTGGCCAAAATTACCCTTATACGGCTCGTCGTACGCCTCCACACCCTTTTGTGG 7107
|||||| ||||| || || || || || || |||| | | | |||||||||||
Sbjct 1847 CATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCATGAAGAAAGGCCCTTTTGTGG 1788
Query 7108 TTTCTGTACGGCGCCCCACAAATCGTGTATACTCACTTTGAAATCGTCTCGGCCCGCGCA 7167
|||||| | ||| |||| || || || ||||||||| || || ||||| |||
Sbjct 1787 TTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTTGAAGTCTTCGCGGCCGCTGCA 1728
Query 7168 CGATCTTTGCAACGCTTCAAACGACCCCGGCACCTGTTTCAAGGCGTCGTTGAGTCCGTC 7227
|| | || | || | || ||| | || |||| |||||||| |||||
Sbjct 1727 GGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTTCAGACTGTCGTTGATGCCGTC 1668
Query 7228 TCCCCCGCAAATGGGCACAAATCCGTACAGCAAATGGCTGAGATTGGGCACGGGCACCTT 7287
|| ||||| || || | || ||||||| ||| || | |||||||| | |||||
Sbjct 1667 GCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGTCAGATTGGGGATCGGCACGCG 1608
Query 7288 GTCTGCGGGAAACTGCCGTCCG-TACACACCCCACTCCACAAAGTACGC 7335
||| |||| |||| || || | ||||| ||||| || || ||||| ||
Sbjct 1607 GTCCACGGGGAACTTCC-TCGGATACACTCCCCATTCTACGAAGTAAGC 1560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 393885596843323
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |